sp2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-968274 T145670_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP2
M04525_2.00 		Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN		 SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX 		0.806 0.884
SP2
M08326_2.00 		Homo sapiens
YCCCGCCCM
KGGGCGGGR		 ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE 		0.806 0.884
SP2
M08092_2.00 		Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0516.1 		0.806 0.884
SP2
M07932_2.00 		Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM		 ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha 		0.806 0.884
SP2
M08911_2.00 		Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A 		0.806 0.884
Sp2
M08970_2.00 		Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B 		0.806 0.884
SP2
M10250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_01 		0.806 0.884
SP2
M10251_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_04 		0.806 0.884
SP2
M10252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_06 		0.806 0.884
SP2
M10253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3_01 		0.806 0.884
SP2
M10254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3 		0.806 0.884
SP2
M04526_2.00 		Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN		 SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX 		0.806 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI54679 C2H2 ZF 471 495
AAI54679 C2H2 ZF 501 525
AAI54679 C2H2 ZF 534 556
CAJ82297 C2H2 ZF 471 495
CAJ82297 C2H2 ZF 501 525
CAJ82297 C2H2 ZF 534 556

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001818 Calypte anna Aan_R001818 N
Afo_R015370 Aptenodytes forsteri Afo_R015370 N
Alligator_sinensis_CCG001076.1 Alligator sinensis Alligator_sinensis_CCG001076.1 N
Brh_R001287 Buceros rhinoceros Brh_R001287 N
Cmyd_10008147 Chelonia mydas Cmyd_10008147 N
ENSAMXG00000011368 Astyanax mexicanus ENSAMXG00000011368 N
ENSAPLG00000008738 Anas platyrhynchos ENSAPLG00000008738 N
ENSFALG00000009729 Ficedula albicollis ENSFALG00000009729 N
ENSGMOG00000016626 Gadus morhua ENSGMOG00000016626 N
ENSLACG00000022361 Latimeria chalumnae ENSLACG00000022361 N
ENSLOCG00000010411 Lepisosteus oculatus ENSLOCG00000010411 N
ENSMEUG00000010075 Macropus eugenii ENSMEUG00000010075 N
ENSNLEG00000000286 Nomascus leucogenys ENSNLEG00000000286 N
ENSONIG00000001794 Oreochromis niloticus ENSONIG00000001794 N
ENSPFOG00000005607 Poecilia formosa ENSPFOG00000005607 N
ENSPSIG00000015046 Pelodiscus sinensis ENSPSIG00000015046 N
ENSSSCG00000008696 Sus scrofa ENSSSCG00000008696 N
ENSTSYG00000006549 Tarsius syrichta ENSTSYG00000006549 N
ENSXMAG00000015874 Xiphophorus maculatus ENSXMAG00000015874 N
Gfo_R003215 Geospiza fortis Gfo_R003215 N
msantd1 Xenopus tropicalis XB-GENE-961851 N
MSANTD1 Gallus gallus ENSGALG00000015628 N
MSANTD1 Cavia porcellus ENSCPOG00000008697 N
msantd1 Danio rerio ENSDARG00000078801 N
MSANTD1 Dasypus novemcinctus ENSDNOG00000024044 N
Msantd1 Dipodomys ordii ENSDORG00000003277 N
MSANTD1 Homo sapiens ENSG00000188981 N
MSANTD1 Tursiops truncatus ENSTTRG00000014477 N
msantd1 Takifugu rubripes ENSTRUG00000009975 N
MSANTD1 Taeniopygia guttata ENSTGUG00000010397 N
MSANTD1 Pteropus vampyrus ENSPVAG00000008266 N
MSANTD1 Procavia capensis ENSPCAG00000016328 N
msantd1 Oryzias latipes ENSORLG00000006023 N
MSANTD1 Anolis carolinensis ENSACAG00000005813 N
Msantd1 Mus musculus ENSMUSG00000051246 N
MSANTD1 Monodelphis domestica ENSMODG00000003508 N
MSANTD1 Macaca mulatta ENSMMUG00000008398 N
MSANTD1 Meleagris gallopavo ENSMGAG00000012930 N
msantd1 Gasterosteus aculeatus ENSGACG00000019426 N