SAKL0H17842g (Lachancea kluyveri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SAKL0H17842g T146645_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RPH1
M00025_2.00 		Saccharomyces cerevisiae
NNHCCCCTAAN
NTTAGGGGDNN		 PBM
Badis et al.(2008)
RPH1_4571 		0.798 0.889
RPH1
M01531_2.00 		Saccharomyces cerevisiae
YNMCCCCTWWWW
WWWWAGGGGKNR		 PBM
Zhu et al.(2009)
Rph1 		0.798 0.889
RPH1
M07455_2.00 		Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1 		0.798 0.889
RPH1
M08522_2.00 		Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN		 Misc
DeBoer et al.(2011)
YER169W_547 		0.798 0.889
GIS1
M00019_2.00 		Saccharomyces cerevisiae
NCCCCTWDNN
NNHWAGGGGN		 PBM
Badis et al.(2008)
GIS1_4481 		0.792 0.889
GIS1
M07449_2.00 		Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1 		0.792 0.889
GIS1
M08515_2.00 		Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD		 Misc
DeBoer et al.(2011)
YDR096W_562 		0.792 0.889
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0H17842g C2H2 ZF 718 741
SAKL0H17842g C2H2 ZF 747 768

Links

Other C2H2 ZF family TFs
Other Lachancea kluyveri TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
3770_YDR096W Saccharomyces mikatae 3770_YDR096W I 0.792
4088_Multiple Saccharomyces paradoxus 4088_Multiple I 0.792
4347_Multiple Saccharomyces bayanus 4347_Multiple I 0.792
6173_YER169W Saccharomyces mikatae 6173_YER169W I 0.822
6757_YER169W Saccharomyces paradoxus 6757_YER169W I 0.798
7085_YER169W Saccharomyces bayanus 7085_YER169W I 0.822
AACERI_AaceriAGR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR117C I 0.827
AGOS_AGR117C Ashbya gossypii AGOS_AGR117C I 0.827
CAGL0L11880g Candida glabrata CAGL0L11880g I 0.827
Ecym_3520 Eremothecium cymbalariae Ecym_3520 I 0.803
GIS1 Saccharomyces cerevisiae YDR096W D 0.792
KAFR_0A02380 Kazachstania africana KAFR_0A02380 I 0.779
KAFR_0B02550 Kazachstania africana KAFR_0B02550 I 0.797
KLLA0_C17710g Kluyveromyces lactis KLLA0_C17710g I 0.827
KLTH0G14454g Kluyveromyces thermotolerans KLTH0G14454g I 0.827
KLTH0G14454g Lachancea thermotolerans KLTH0G14454g I 0.827
KNAG_0G01870 Kazachstania naganishii KNAG_0G01870 I 0.827
KNAG_0H03010 Kazachstania naganishii KNAG_0H03010 I 0.792
Kpol_1032p52 Vanderwaltozyma polyspora Kpol_1032p52 I 0.803
Kwal_23453 Kluyveromyces waltii Kwal_23453 I 0.827
LALA0_S07e07030g Lachancea lanzarotensis LALA0_S07e07030g I 0.827
NCAS_0B04840 Naumovozyma castellii NCAS_0B04840 I 0.822
NDAI_0B02250 Naumovozyma dairenensis NDAI_0B02250 I 0.822
RPH1 Saccharomyces cerevisiae YER169W D 0.798
Scas_Contig681.19 Saccharomyces castellii Scas_Contig681.19 I 0.822
SKUD_141701 Saccharomyces kudriavzevii SKUD_141701 I 0.792
SU7_0636 Saccharomyces arboricola SU7_0636 I 0.792
SU7_0955 Saccharomyces arboricola SU7_0955 I 0.822
TBLA_0E04220 Tetrapisispora blattae TBLA_0E04220 I 0.759
TBLA_0F03830 Tetrapisispora blattae TBLA_0F03830 I 0.827
TDEL_0A01300 Torulaspora delbrueckii TDEL_0A01300 I 0.803
TPHA_0A01940 Tetrapisispora phaffii TPHA_0A01940 I 0.797
ZBAI_04846 Zygosaccharomyces bailii ZBAI_04846 I 0.827
ZBAI_06407 Zygosaccharomyces bailii ZBAI_06407 I 0.827
ZYRO0B11770g Zygosaccharomyces rouxii ZYRO0B11770g I 0.827