BGLB001048 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB001048 T150647_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.775 0.831
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.775 0.825
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.775 0.825
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.775 0.825
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.775 0.825
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.775 0.825
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.775 0.825
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.775 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB001048-PA C2H2 ZF 270 294
BGLB001048-PA C2H2 ZF 300 324
BGLB001048-PA C2H2 ZF 330 356
BGLB001048-PA C2H2 ZF 362 386
BGLB001048-PA C2H2 ZF 392 416
BGLB001048-PA C2H2 ZF 422 446
BGLB001048-PA C2H2 ZF 452 474

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH73068 Xenopus laevis AAH73068 I 0.774
Aan_R006576 Calypte anna Aan_R006576 I 0.775
Afo_R014591 Aptenodytes forsteri Afo_R014591 I 0.775
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I 0.775
Brh_R005520 Buceros rhinoceros Brh_R005520 I 0.775
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I 0.775
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I 0.764
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I 0.775
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I 0.770
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I 0.775
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I 0.767
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I 0.775
ENSLOCG00000003619 Lepisosteus oculatus ENSLOCG00000003619 I 0.774
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I 0.757
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I 0.775
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I 0.775
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I 0.774
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I 0.767
ENSP00000379847 Macaca fascicularis ENSP00000379847 I 0.775
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I 0.774
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I 0.775
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I 0.767
ENSPPYG00000003495 Pongo abelii ENSPPYG00000003495 I 0.775
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I 0.775
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I 0.775
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I 0.775
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I 0.775
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I 0.767
Gfo_R011843 Geospiza fortis Gfo_R011843 I 0.775
LotgiG222832 Lottia gigantea LotgiG222832 I 0.772
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I 0.772
Ocbimv22038914m.g Octopus bimaculoides Ocbimv22038914m.g I 0.761
Ogr18895 Ophisaurus gracilis Ogr18895 I 0.771
Pvit_03784 Pogona vitticeps Pvit_03784 I 0.775
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I 0.769
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I 0.769
SMAR015659 Strigamia maritima SMAR015659 I 0.763
Tal_R001092 Tyto alba Tal_R001092 I 0.775
Zfp143 Rattus norvegicus ENSRNOG00000010087 I 0.775
Zfp143 Mus musculus ENSMUSG00000061079 D 0.775
ZNF143 Ochotona princeps ENSOPRG00000005466 I 0.775
ZNF143 Gallus gallus ENSGALG00000005787 I 0.775
ZNF143 Loxodonta africana ENSLAFG00000004487 I 0.775
ZNF143 Homo sapiens ENSG00000166478 D 0.775
ZNF143 Felis catus ENSFCAG00000002342 I 0.775
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I 0.775
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I 0.775
ZNF143 Callithrix jacchus ENSCJAG00000011327 I 0.775
ZNF143 Cavia porcellus ENSCPOG00000003109 I 0.775
ZNF143 Microcebus murinus ENSMICG00000004353 I 0.775
ZNF143 Myotis lucifugus ENSMLUG00000000213 I 0.774
ZNF143 Macaca mulatta ENSMMUG00000008758 I 0.775
ZNF143 Monodelphis domestica ENSMODG00000007909 I 0.775
ZNF143 Equus caballus ENSECAG00000018889 I 0.775
ZNF143 Tursiops truncatus ENSTTRG00000015353 I 0.774
znf143 Takifugu rubripes ENSTRUG00000009324 I 0.765
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I 0.772
znf143 Xenopus tropicalis XB-GENE-1012504 I 0.774
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I 0.775
ZNF143 Sorex araneus ENSSARG00000007780 I 0.775
ZNF143 Pan troglodytes ENSPTRG00000003349 I 0.775
ZNF143 Otolemur garnettii ENSOGAG00000011518 I 0.775
ZNF143 Anolis carolinensis ENSACAG00000009338 I 0.775
ZNF143 Canis familiaris ENSCAFG00000007373 I 0.775
znf143.S Xenopus laevis XB-GENE-1012509 I 0.774
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I 0.765
znf143b Oryzias latipes ENSORLG00000001130 I 0.758
znf143b Danio rerio ENSDARG00000041581 I 0.765
znf143b Gasterosteus aculeatus ENSGACG00000009776 I 0.767
ZNF76 Cavia porcellus ENSCPOG00000007381 I 0.760
znf76 Danio rerio ENSDARG00000013279 I 0.760