HPLM_0000529101 (Haemonchus placei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HPLM_0000529101 T154246_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.820 0.928
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.766 0.768
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.766 0.768
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.766 0.768
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.766 0.768
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.766 0.768
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.766 0.768
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.766 0.768
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.766 0.768
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.766 0.768
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.766 0.768
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.766 0.768
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.766 0.768
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.766 0.768
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.766 0.768
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.766 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0000529101-mRNA-1 C2H2 ZF 116 138
HPLM_0000529101-mRNA-1 C2H2 ZF 144 168
HPLM_0000529101-mRNA-1 C2H2 ZF 174 196

Links

Other C2H2 ZF family TFs
Other Haemonchus placei TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00584 Capronia coronata A1O1_00584 N
A1O5_03686 Cladophialophora psammophila A1O5_03686 N
A1O7_00496 Cladophialophora yegresii A1O7_00496 N
A1O9_04841 Exophiala aquamarina A1O9_04841 N
BAUCODRAFT_119676 Baudoinia compniacensis BAUCODRAFT_119676 N
Bcin06g06250 Botrytis cinerea Bcin06g06250 N
CFIO01_01363 Colletotrichum fioriniae CFIO01_01363 N
CGGC5_13848 Colletotrichum gloeosporioides CGGC5_13848 N
CH063_09851 Colletotrichum higginsianum CH063_09851 N
CHGG_01491 Chaetomium globosum CHGG_01491 N
Cob_08011 Colletotrichum orbiculare Cob_08011 N
COCCADRAFT_35218 Bipolaris zeicola COCCADRAFT_35218 N
COCSADRAFT_109777 Bipolaris sorokiniana COCSADRAFT_109777 N
CSUB01_03526 Colletotrichum sublineola CSUB01_03526 N
DOTSEDRAFT_74979 Dothistroma septosporum DOTSEDRAFT_74979 N
EPUS_07706 Endocarpon pusillum EPUS_07706 N
e_gw1.11.76.1 Mycosphaerella graminicola e_gw1.11.76.1 N
fgenesh1_pg.C_scaffold_4000277 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4000277 N
G647_00537 Cladophialophora carrionii G647_00537 N
GGTG_01539 Gaeumannomyces graminis GGTG_01539 N
GLRG_04468 Colletotrichum graminicola GLRG_04468 N
gw1.6.17.1 Mycosphaerella fijiensis gw1.6.17.1 N
HMPREF1120_06189 Exophiala dermatitidis HMPREF1120_06189 N
HMPREF1541_05902 Cyphellophora europaea HMPREF1541_05902 N
LEMA_P096450.1 Leptosphaeria maculans LEMA_P096450.1 N
MBM_04902 Marssonina brunnea MBM_04902 N
MGG_01624 Magnaporthe oryzae MGG_01624 N
MYCFIDRAFT_115419 Pseudocercospora fijiensis MYCFIDRAFT_115419 N
Mycgr3G49868 Zymoseptoria tritici Mycgr3G49868 N
MYCTH_98955 Myceliophthora thermophila MYCTH_98955 N
PAAG_11207 Paracoccidioides sp lutzii PAAG_11207 N
PABG_01676 Paracoccidioides brasiliensis PABG_01676 N
PMAA_029710 Penicillium marneffei PMAA_029710 N
PMAA_029710 Talaromyces marneffei PMAA_029710 N
PTRG_06263 Pyrenophora triticirepentis PTRG_06263 N
PV04_01563 Capronia semiimmersa PV04_01563 N
PV06_03594 Exophiala oligosperma PV06_03594 N
PV07_10166 Cladophialophora immunda PV07_10166 N
PV08_06011 Exophiala spinifera PV08_06011 N
PV09_05917 Verruconis gallopava PV09_05917 N
PV10_07538 Exophiala mesophila PV10_07538 N
PV11_08024 Exophiala sideris PV11_08024 N
PVAR5_2222 Byssochlamys spectabilis PVAR5_2222 N
SBOR_0088 Sclerotinia borealis SBOR_0088 N
THITE_19726 Thielavia terrestris THITE_19726 N
TSTA_068680 Talaromyces stipitatus TSTA_068680 N
UCRNP2_236 Neofusicoccum parvum UCRNP2_236 N
UCRPA7_3950 Togninia minima UCRPA7_3950 N
V499_01440 Pseudogymnoascus pannorum V499_01440 N
W97_06158 Coniosporium apollinis W97_06158 N
Z517_08280 Fonsecaea pedrosoi Z517_08280 N
Z518_04016 Rhinocladiella mackenziei Z518_04016 N
Z519_03005 Cladophialophora bantiana Z519_03005 N