scaffold152-EXSNAP2012.15 (Pristionchus exspectatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 scaffold152-EXSNAP2012.15 T156026_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold152-EXSNAP2012.15 C2H2 ZF 16 38
scaffold152-EXSNAP2012.15 C2H2 ZF 44 67

Links

Other C2H2 ZF family TFs
Other Pristionchus exspectatus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g052880 Brassica oleracea Bo2g052880 N
Bostr.26959s0284 Boechera stricta Bostr.26959s0284 N
Bra039762 Brassica rapa Bra039762 N
Cagra.0463s0002 Capsella grandiflora Cagra.0463s0002 N
Carubv10020171m.g Capsella rubella Carubv10020171m.g N
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I
F775_03572 Aegilops tauschii F775_03572 N
GLYMA11G33720 Glycine max GLYMA11G33720 I
GLYMA18G04500 Glycine max GLYMA18G04500 I
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I
GRMZM2G144744 Zea mays GRMZM2G144744 N
Lus10009133.g Linum usitatissimum Lus10009133.g N
MDP0000669451 Malus domestica MDP0000669451 I
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N
Pm014329 Prunus mume Pm014329 I
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I
RGL1 Arabidopsis lyrata fgenesh2_kg.2__868__AT1G66350.1 N
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N
TCM_019165 Theobroma cacao TCM_019165 N
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N