CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000929801
(
Strongylus vulgaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVUK_0000929801
T157472_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000929801-mRNA-1
C2H2 ZF
50
72
CACKDCGKLFNSVWYLKQHAVKH
SVUK_0000929801-mRNA-1
C2H2 ZF
78
98
FKCKFCFKTYKFRSNLYQHKC
Links
Other
C2H2 ZF
family TFs
Other
Strongylus vulgaris
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_01084
Ancylostoma duodenale
ANCDUO_01084
N
0.827
ASIM_0002110101
Anisakis simplex
ASIM_0002110101
N
0.803
CGOC_0000456701
Cylicostephanus goldi
CGOC_0000456701
N
0.827
CRE00047
Caenorhabditis remanei
CRE00047
N
0.803
EVEC_0001288301
Enterobius vermicularis
EVEC_0001288301
N
0.788
HCOI02029400
Haemonchus contortus
HCOI02029400
N
0.818
HPBE_0000797201
Heligmosomoides bakeri
HPBE_0000797201
N
0.818
L898_g8368
Steinernema monticolum
L898_g8368
N
0.779
nRc.2.0.1.g23054
Romanomermis culicivorax
nRc.2.0.1.g23054
N
0.782
RSKR_0001155800
Rhabditophanes kr3021
RSKR_0001155800
N
0.803
SPAL_0000767800
Strongyloides papillosus
SPAL_0000767800
N
0.818