CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRE_0001183001
(
Trichobilharzia regenti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
TRE_0001183001
T158007_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRE_0001183001-mRNA-1
C2H2 ZF
26
48
YKCSHCGRGFSKAYNRTIHERTH
TRE_0001183001-mRNA-1
C2H2 ZF
54
73
FGCDVCSRRFRRKDHLRDHR
Links
Other
C2H2 ZF
family TFs
Other
Trichobilharzia regenti
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_05914
Schistosoma haematobium
A_05914
N
0.827
HDID_0001021001
Hymenolepis diminuta
HDID_0001021001
N
0.764
PXEA_0003350801
Protopolystoma xenopodis
PXEA_0003350801
N
0.762
Sjc_0028750
Schistosoma japonicum
Sjc_0028750
N
0.821
Smp_152210
Schistosoma mansoni
Smp_152210
N
0.817
SMTD_0000181401
Schistosoma mattheei
SMTD_0000181401
N
0.827
SPER_0000495201
Spirometra erinaceieuropaei
SPER_0000495201
N
0.798
SSLN_0001439901
Schistocephalus solidus
SSLN_0001439901
N
0.788
T265_05681
Opisthorchis viverrini
T265_05681
N
0.779
TASK_0000489501
Taenia asiatica
TASK_0000489501
N
0.764