NBR_0001165301 (Nippostrongylus brasiliensis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 NBR_0001165301 T159655_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.947 0.947
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001165301-mRNA-1 C2HC ZF 88 115
NBR_0001165301-mRNA-1 C2HC ZF 134 162

Links

Other C2HC ZF family TFs
Other Nippostrongylus brasiliensis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.000
Bo1g129710 Brassica oleracea Bo1g129710 I 0.000
Bra021594 Brassica rapa Bra021594 I 0.000
BRADI1G33550 Brachypodium distachyon BRADI1G33550 I 0.000
GRMZM2G052720 Zea mays GRMZM2G052720 N 0.000
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.000
GRMZM2G322672 Zea mays GRMZM2G322672 N 0.000
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.000
OBART02G04420 Oryza barthii OBART02G04420 N 0.000
OBART06G25530 Oryza barthii OBART06G25530 N 0.000
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.000
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.000
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N 0.000
OMERI02G05190 Oryza meridionalis OMERI02G05190 N 0.000
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.000
OMERI06G25700 Oryza meridionalis OMERI06G25700 N 0.000
ONIVA02G04420 Oryza nivara ONIVA02G04420 N 0.000
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.000
ONIVA06G28540 Oryza nivara ONIVA06G28540 N 0.000
OPUNC06G23160 Oryza punctata OPUNC06G23160 N 0.000
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.000
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.000
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N 0.000
OS04G0669200 Oryza sativa OS04G0669200 I 0.000
OS06G0691100 Oryza sativa OS06G0691100 N 0.000
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N 0.000
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.000
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.000
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.000
Si023330m.g Setaria italica Si023330m.g I 0.000