nLs.2.1.2.g09672 (Litomosoides sigmodontis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 nLs.2.1.2.g09672 T159658_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.930 0.930
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t09672-RA C2HC ZF 89 116
nLs.2.1.2.t09672-RA C2HC ZF 135 163

Links

Other C2HC ZF family TFs
Other Litomosoides sigmodontis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AATE000335 Anopheles atroparvus AATE000335 I 0.719
AATE018011 Anopheles atroparvus AATE018011 I 0.719
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I 0.982
ACEP14857 Atta cephalotes ACEP14857 I 0.754
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I 0.982
ACOM027979 Anopheles coluzzii ACOM027979 I 0.719
ACYPI31510 Acyrthosiphon pisum ACYPI31510 I 0.772
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I 0.719
AFAF001557 Anopheles farauti AFAF001557 I 0.719
AFAF020264 Anopheles farauti AFAF020264 I 0.754
AMAM003778 Anopheles maculatus AMAM003778 I 0.754
AMAM009924 Anopheles maculatus AMAM009924 I 0.719
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I 0.982
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I 0.982
ASU_06642 Ascaris suum ASU_06642 I 0.982
BXY_0842900 Bursaphelenchus xylophilus BXY_0842900 I 0.912
CapteG130298 Capitella teleta CapteG130298 I 0.774
CBG03854 Caenorhabditis briggsae CBG03854 I 0.930
CBN09920 Caenorhabditis brenneri CBN09920 I 0.930
CBN18838 Caenorhabditis brenneri CBN18838 I 0.930
CG43689 Drosophila melanogaster FBgn0263772 I 0.719
CJA03417 Caenorhabditis japonica CJA03417 I 0.947
Cmyd_10014184 Chelonia mydas Cmyd_10014184 I 0.842
CRE08084 Caenorhabditis remanei CRE08084 I 0.930
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I 0.982
ENSAMEG00000015014 Ailuropoda melanoleuca ENSAMEG00000015014 I 0.807
ENSBTAG00000003540 Bos taurus ENSBTAG00000003540 I 0.842
ENSLACG00000008399 Latimeria chalumnae ENSLACG00000008399 I 0.825
ENSTGUG00000014218 Taeniopygia guttata ENSTGUG00000014218 I 0.807
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I 0.982
GI16394 Drosophila mojavensis FBgn0139142 I 0.719
GL14771 Drosophila persimilis FBgn0152375 I 0.719
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I 0.982
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N 0.702
HelroG85268 Helobdella robusta HelroG85268 I 0.719
HHAL001110-PA Halyomorpha halys HHAL001110-PA I 0.719
ISCW018799 Ixodes scapularis ISCW018799 I 0.825
L596_g1281 Steinernema carpocapsae L596_g1281 I 0.947
L889_g28085 Steinernema feltiae L889_g28085 I 0.947
L893_g1446 Steinernema glaseri L893_g1446 I 0.965
LCUP002242 Lucilia cuprina LCUP002242 I 0.719
Minc05804 Meloidogyne incognita Minc05804 I 0.877
MYT1L Homo sapiens ENSG00000186487 I 0.842
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.842
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I 0.982
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I 1.000
NECAME_10938 Necator americanus NECAME_10938 I 0.982
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I 0.820
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I 0.982
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I 0.982
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I 0.965
Smp_168610 Schistosoma mansoni Smp_168610 N 0.719
SMU15028607 Schmidtea mediterranea SMU15028607 I 0.842
SMUV_0000666101 Syphacia muris SMUV_0000666101 I 0.982
SPAL_0000489100 Strongyloides papillosus SPAL_0000489100 I 0.912
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I 0.982
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I 0.982
ST18 Homo sapiens ENSG00000147488 I 0.807
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I 0.982
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I 0.912
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I 0.982
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I 0.982
WBGene00238210 Onchocerca volvulus WBGene00238210 I 1.000
YQE_11977 Dendroctonus ponderosae YQE_11977 I 0.707
ztf-11 Caenorhabditis elegans WBGene00009939 D 0.930