PTRK_0001788400 (Parastrongyloides trichosuri)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 PTRK_0001788400 T159667_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.912 0.912
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0001788400.1 C2HC ZF 235 262
PTRK_0001788400.1 C2HC ZF 281 309

Links

Other C2HC ZF family TFs
Other Parastrongyloides trichosuri TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.000
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.000
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.000
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.000
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.000
BGIOSGA034613 Oryza indica BGIOSGA034613 N 0.000
BGIOSGA036757 Oryza indica BGIOSGA036757 N 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo2g095820 Brassica oleracea Bo2g095820 I 0.000
Bo5g068250 Brassica oleracea Bo5g068250 I 0.000
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.000
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.000
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra008454 Brassica rapa Bra008454 I 0.000
Bra008456 Brassica rapa Bra008456 I 0.000
Bra008459 Brassica rapa Bra008459 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra023211 Brassica rapa Bra023211 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.000
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.000
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
F775_02479 Aegilops tauschii F775_02479 N 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.000
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
LPERR12G01070 Leersia perrieri LPERR12G01070 I 0.000
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.000
MDP0000828055 Malus domestica MDP0000828055 I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
mgf009193m Mimulus guttatus mgf009193m I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.000
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB05G27830 Oryza brachyantha OB05G27830 I 0.000
OB05G27850 Oryza brachyantha OB05G27850 I 0.000
OBART05G08130 Oryza barthii OBART05G08130 I 0.000
OBART05G20330 Oryza barthii OBART05G20330 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OBART11G01100 Oryza barthii OBART11G01100 N 0.000
OBART11G01110 Oryza barthii OBART11G01110 I 0.000
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.000
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.000
OGLUM05G21440 Oryza glumaepatula OGLUM05G21440 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.000
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.000
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.000
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.000
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
OMERI11G01520 Oryza meridionalis OMERI11G01520 N 0.000
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.000
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.000
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
ONIVA11G01050 Oryza nivara ONIVA11G01050 N 0.000
ONIVA11G01230 Oryza nivara ONIVA11G01230 N 0.000
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.000
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.000
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.000
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.000
OPUNC11G00970 Oryza punctata OPUNC11G00970 N 0.000
OPUNC12G00970 Oryza punctata OPUNC12G00970 N 0.000
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.000
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.000
ORGLA05G0177400 Oryza glaberrima ORGLA05G0177400 I 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N 0.000
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.000
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N 0.000
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.000
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.000
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.000
OS05G0478400 Oryza sativa OS05G0478400 I 0.000
OS05G0478800 Oryza sativa OS05G0478800 I 0.000
OS11G0117400 Oryza sativa OS11G0117400 N 0.000
OS12G0116600 Oryza sativa OS12G0116600 N 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.000
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.000
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.000
Si012735m.g Setaria italica Si012735m.g I 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000