OPUNC02G31840 (Oryza punctata)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 OPUNC02G31840 T160245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.714 0.714
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.714 0.714
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.714 0.714
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.714 0.714
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.714 0.714
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC02G31840.1 CBF/NF-Y 140 195
OPUNC02G31840.2 CBF/NF-Y 97 152

Links

Other CBF/NF-Y family TFs
Other Oryza punctata TFs

559 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29640.m000403 Ricinus communis 29640.m000403 I 0.000
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.000
Aquca_027_00311 Aquilegia coerulea Aquca_027_00311 I 0.000
BGIOSGA005557 Oryza indica BGIOSGA005557 I 0.000
BGIOSGA029071 Oryza indica BGIOSGA029071 I 0.000
Bo6g022410 Brassica oleracea Bo6g022410 I 0.000
Bo7g040820 Brassica oleracea Bo7g040820 I 0.000
Bostr.26675s0388 Boechera stricta Bostr.26675s0388 I 0.000
Bra014924 Brassica rapa Bra014924 I 0.000
Bra018864 Brassica rapa Bra018864 I 0.000
BRADI2G21067 Brachypodium distachyon BRADI2G21067 I 0.000
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.000
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.000
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.000
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.000
cassava43266.valid.m1 Manihot esculenta cassava43266.valid.m1 I 0.000
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.000
Ca_17824 Cicer arietinum Ca_17824 I 0.000
chr2.LjT24P12.30.nd Lotus japonicus chr2.LjT24P12.30.nd I 0.000
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.000
Ciclev10009361m.g Citrus clementina Ciclev10009361m.g I 0.000
Ciclev10016668m.g Citrus clementina Ciclev10016668m.g I 0.000
Ciclev10026032m.g Citrus clementina Ciclev10026032m.g I 0.000
Cla003319 Citrullus lanatus Cla003319 I 0.000
Cla005423 Citrullus lanatus Cla005423 I 0.000
Cla013723 Citrullus lanatus Cla013723 I 0.000
Cucsa.042770 Cucumis sativus Cucsa.042770 I 0.000
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.000
Cucsa.190200 Cucumis sativus Cucsa.190200 I 0.000
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.000
ERF3 Arabidopsis thaliana AT1G50640 D 0.000
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.000
Eucgr.A01091 Eucalyptus grandis Eucgr.A01091 I 0.000
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.000
evm.TU.supercontig_12.251 Carica papaya evm.TU.supercontig_12.251 I 0.000
evm.TU.supercontig_132.31 Carica papaya evm.TU.supercontig_132.31 I 0.000
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.000
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.000
fgenesh2_kg.3__2537__AT3G23220.1 Arabidopsis lyrata fgenesh2_kg.3__2537__AT3G23220.1 I 0.000
gene01152-v1.0-hybrid Fragaria vesca gene01152-v1.0-hybrid I 0.000
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.000
GLYMA02G43500 Glycine max GLYMA02G43500 I 0.000
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.000
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.000
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.000
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.000
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.000
GLYMA14G05470 Glycine max GLYMA14G05470 I 0.000
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.000
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.000
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.000
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.000
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.000
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.000
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.000
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.000
GRMZM2G174347 Zea mays GRMZM2G174347 I 0.000
GRMZM2G175525 Zea mays GRMZM2G175525 I 0.000
GSMUA_Achr1G18230_001 Musa acuminata GSMUA_Achr1G18230_001 I 0.000
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.000
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.000
GSMUA_Achr4G04060_001 Musa acuminata GSMUA_Achr4G04060_001 I 0.000
GSMUA_Achr4G06170_001 Musa acuminata GSMUA_Achr4G06170_001 I 0.000
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.000
GSMUA_Achr4G11430_001 Musa acuminata GSMUA_Achr4G11430_001 I 0.000
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.000
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.000
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.000
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.000
LPERR02G27530 Leersia perrieri LPERR02G27530 I 0.000
LPERR08G14810 Leersia perrieri LPERR08G14810 I 0.000
Lus10029987.g Linum usitatissimum Lus10029987.g I 0.000
Lus10035329.g Linum usitatissimum Lus10035329.g I 0.000
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.000
MDP0000236605 Malus domestica MDP0000236605 I 0.000
MDP0000243113 Malus domestica MDP0000243113 I 0.000
MDP0000310904 Malus domestica MDP0000310904 I 0.000
MDP0000457509 Malus domestica MDP0000457509 I 0.000
MDP0000542633 Malus domestica MDP0000542633 I 0.000
MDP0000629527 Malus domestica MDP0000629527 I 0.000
MDP0000744693 Malus domestica MDP0000744693 I 0.000
MDP0000839828 Malus domestica MDP0000839828 I 0.000
mgf007166m Mimulus guttatus mgf007166m I 0.000
mgf016282m Mimulus guttatus mgf016282m I 0.000
MLOC_10878 Hordeum vulgare MLOC_10878 I 0.000
MTR_5g085070 Medicago truncatula MTR_5g085070 I 0.000
MTR_5g085100 Medicago truncatula MTR_5g085100 I 0.000
OBART02G33690 Oryza barthii OBART02G33690 I 0.000
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.000
OGLUM02G34120 Oryza glumaepatula OGLUM02G34120 I 0.000
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.000
OMERI02G32080 Oryza meridionalis OMERI02G32080 I 0.000
OMERI08G16840 Oryza meridionalis OMERI08G16840 I 0.000
ONIVA02G33420 Oryza nivara ONIVA02G33420 I 0.000
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.000
OPUNC02G31100 Oryza punctata OPUNC02G31100 I 0.000
orange1.1g027990m.g Citrus sinensis orange1.1g027990m.g I 0.000
orange1.1g039390m.g Citrus sinensis orange1.1g039390m.g I 0.000
orange1.1g045783m.g Citrus sinensis orange1.1g045783m.g I 0.000
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.000
ORGLA02G0291300 Oryza glaberrima ORGLA02G0291300 I 0.000
ORGLA08G0225800 Oryza glaberrima ORGLA08G0225800 I 0.000
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.000
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.000
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.000
Pavir.J03216 Panicum virgatum Pavir.J03216 I 0.000
Pavir.J28880 Panicum virgatum Pavir.J28880 I 0.000
Pavir.J32690 Panicum virgatum Pavir.J32690 I 0.000
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.000
PGSC0003DMG400014417 Solanum tuberosum PGSC0003DMG400014417 I 0.000
PGSC0003DMG400022305 Solanum tuberosum PGSC0003DMG400022305 I 0.000
PK23186.1 Cannabis sativa PK23186.1 I 0.000
PK25211.1 Cannabis sativa PK25211.1 I 0.000
Pm011907 Prunus mume Pm011907 I 0.000
Pm014953 Prunus mume Pm014953 I 0.000
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.000
POPTR_0007s11080 Populus trichocarpa POPTR_0007s11080 I 0.000
PRUPE_ppa010804mg Prunus persica PRUPE_ppa010804mg I 0.000
PRUPE_ppa010893mg Prunus persica PRUPE_ppa010893mg I 0.000
SapurV1A.0126s0320 Salix purpurea SapurV1A.0126s0320 I 0.000
SapurV1A.0126s0330 Salix purpurea SapurV1A.0126s0330 I 0.000
SapurV1A.0711s0020 Salix purpurea SapurV1A.0711s0020 I 0.000
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.000
Sb07g025843 Sorghum bicolor Sb07g025843 I 0.000
Sb08g004260 Sorghum bicolor Sb08g004260 I 0.000
SELMODRAFT_131245 Selaginella moellendorffii SELMODRAFT_131245 I 0.000
SELMODRAFT_28277 Selaginella moellendorffii SELMODRAFT_28277 I 0.000
Si018144m.g Setaria italica Si018144m.g I 0.000
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.000
Solyc07g064890.1 Solanum lycopersicum Solyc07g064890.1 I 0.000
Solyc10g006130.1 Solanum lycopersicum Solyc10g006130.1 I 0.000
TCM_030804 Theobroma cacao TCM_030804 I 0.000
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.000
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.000
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.000
VIT_12s0059g01460 Vitis vinifera VIT_12s0059g01460 I 0.000
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.000