CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.28625s0302
(
Boechera stricta
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Bostr.28625s0302
T160630_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.28625s0302.1.p
CBF/NF-Y
138
200
EPIFVNAKQYQAILRRRQHRAKLEAQNKLIKVRKSVYEIMQPYLHESRHLHALKRARGSGGRF
Bostr.28625s0302.2.p
CBF/NF-Y
138
193
EPIFVNAKQYQAILRRRQHRAKLEAQNKLIKVRKPYLHESRHLHALKRARGSGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Boechera stricta
TFs
463 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005610
Calypte anna
Aan_R005610
I
0.000
Afo_R015053
Aptenodytes forsteri
Afo_R015053
I
0.000
BGLB003972
Biomphalaria glabrata
BGLB003972
I
0.000
ENSAPLG00000004964
Anas platyrhynchos
ENSAPLG00000004964
I
0.000
ENSCSAVG00000004749
Ciona savignyi
ENSCSAVG00000004749
I
0.000
ENSGALG00000007870
Gallus gallus
ENSGALG00000007870
I
0.000
ENSMPUG00000000304
Mustela putorius furo
ENSMPUG00000000304
I
0.000
ENSOARG00000018276
Ovis aries
ENSOARG00000018276
I
0.000
ENSPFOG00000006336
Poecilia formosa
ENSPFOG00000006336
I
0.000
ENSTRUG00000002512
Takifugu rubripes
ENSTRUG00000002512
I
0.000
SMAD3
Homo sapiens
ENSG00000166949
D
0.000
SMAD3
Anolis carolinensis
ENSACAG00000009914
I
0.000
SMAD3
Callithrix jacchus
ENSCJAG00000002088
I
0.000
SMAD3
Sus scrofa
ENSSSCG00000004952
I
0.000
SMAD3
Myotis lucifugus
ENSMLUG00000002185
I
0.000
smad3a
Tetraodon nigroviridis
ENSTNIG00000009546
I
0.000
smad3a
Takifugu rubripes
ENSTRUG00000016858
I
0.000
smad3a
Danio rerio
ENSDARG00000036096
I
0.000
smad3b
Takifugu rubripes
ENSTRUG00000014802
I
0.000
SMAR008230
Strigamia maritima
SMAR008230
I
0.000
TriadG49742
Trichoplax adhaerens
TriadG49742
I
0.000