estExt_gwp_gw1.C_410063 (Physcomitrella patens)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00313 (CSD) IPR002059 estExt_gwp_gw1.C_410063 T165384_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp_gw1.C_410063 CSD 14 80

Links

Other CSD family TFs
Other Physcomitrella patens TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00017p00206510 Amborella trichopoda AMTR_s00017p00206510 N 0.742
AZW_EuGene.0000110131 Micromonas pusilla AZW_EuGene.0000110131 N 0.712
BRADI3G01960 Brachypodium distachyon BRADI3G01960 N 0.712
cassava12557.valid.m1 Manihot esculenta cassava12557.valid.m1 N 0.742
cassava29163.valid.m1 Manihot esculenta cassava29163.valid.m1 N 0.773
CHLREDRAFT_126810 Chlamydomonas reinhardtii CHLREDRAFT_126810 N 0.742
chr3.CM0112.180.nd Lotus japonicus chr3.CM0112.180.nd N 0.727
EMIHUDRAFT_78118 Emiliania huxleyi EMIHUDRAFT_78118 N 0.712
estExt_fgenesh1_pg.C_10541 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10541 N 0.788
estExt_fgeneshCV_pm.C_10002 Chlorella vulgaris estExt_fgeneshCV_pm.C_10002 N 0.788
estExt_gwp_gw1.C_640002 Physcomitrella patens estExt_gwp_gw1.C_640002 N 1.000
Eucgr.I01395 Eucalyptus grandis Eucgr.I01395 N 0.707
EuGene.0200010100 Micromonas sp RCC299 EuGene.0200010100 N 0.742
evm.TU.supercontig_37.170 Carica papaya evm.TU.supercontig_37.170 N 0.727
e_gw1.1.536.1 Chlorella vulgaris e_gw1.1.536.1 N 0.803
fgenesh1_pg.1_#_433 Coccomyxa subellipsoidea C169 fgenesh1_pg.1_#_433 N 0.803
gene07618-v1.0-hybrid Fragaria vesca gene07618-v1.0-hybrid N 0.712
gw1.103.78.1 Physcomitrella patens gw1.103.78.1 N 0.985
IGS.gm_9_00317 Chlorella NC64A IGS.gm_9_00317 N 0.754
mgf015980m Mimulus guttatus mgf015980m I 0.712
PK01533.1 Cannabis sativa PK01533.1 N 0.712
Pm020837 Prunus mume Pm020837 I 0.727
POPTR_0009s13460 Populus trichocarpa POPTR_0009s13460 N 0.712
SapurV1A.0514s0160 Salix purpurea SapurV1A.0514s0160 N 0.712
SELMODRAFT_123455 Selaginella moellendorffii SELMODRAFT_123455 N 0.727
SELMODRAFT_154869 Selaginella moellendorffii SELMODRAFT_154869 N 0.727
SELMODRAFT_186937 Selaginella moellendorffii SELMODRAFT_186937 N 0.773
SELMODRAFT_187582 Selaginella moellendorffii SELMODRAFT_187582 N 0.773
SELMODRAFT_451445 Selaginella moellendorffii SELMODRAFT_451445 N 0.712
SELMODRAFT_58801 Selaginella moellendorffii SELMODRAFT_58801 N 0.734
Traes_6AS_539B381F1 Triticum aestivum Traes_6AS_539B381F1 N 0.712
VIT_03s0038g02130 Vitis vinifera VIT_03s0038g02130 I 0.788