scaffold54-EXSNAP2012.9 (Pristionchus exspectatus)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00751 (DM) IPR001275 scaffold54-EXSNAP2012.9 T170009_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
dmd-9
M00661_2.00 		Caenorhabditis elegans
ACCTTT
AAAGGT		 PBM
Narasimhan et al.(2015)
pTH8999 		0.870 0.689
For this family, TFs with SR scores > 0.845 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold54-EXSNAP2012.9 DM 58 102

Links

Other DM family TFs
Other Pristionchus exspectatus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000878601 Angiostrongylus costaricensis ACOC_0000878601 I 0.941
ANCCEY_11797 Ancylostoma ceylanicum ANCCEY_11797 I 0.941
ASIM_0001248901 Anisakis simplex ASIM_0001248901 I 0.952
ASU_04764 Ascaris suum ASU_04764 I 0.943
BXY_0004500 Bursaphelenchus xylophilus BXY_0004500 I 0.946
CBG03381 Caenorhabditis briggsae CBG03381 I 0.861
CBG18895 Caenorhabditis briggsae CBG18895 N 0.941
CJA06642 Caenorhabditis japonica CJA06642 N 0.941
CJA18545 Caenorhabditis japonica CJA18545 I 0.862
CRE30013 Caenorhabditis remanei CRE30013 I 0.868
CRE30014 Caenorhabditis remanei CRE30014 I 0.868
CRE30862 Caenorhabditis remanei CRE30862 N 0.941
dmd-7 Caenorhabditis elegans WBGene00019521 N 0.941
dmd-9 Caenorhabditis elegans WBGene00022060 D 0.870
EVEC_0001300201 Enterobius vermicularis EVEC_0001300201 I 0.943
GPLIN_000574100 Globodera pallida GPLIN_000574100 N 0.921
Hba_20459 Heterorhabditis bacteriophora Hba_20459 I 0.940
HCOI00602900 Haemonchus contortus HCOI00602900 I 0.941
HCOI01956800 Haemonchus contortus HCOI01956800 I 0.941
L596_g25360 Steinernema carpocapsae L596_g25360 I 0.940
L889_g19153 Steinernema feltiae L889_g19153 I 0.939
L892_g27590 Steinernema scapterisci L892_g27590 I 0.940
L893_g6833 Steinernema glaseri L893_g6833 I 0.937
L898_g6334 Steinernema monticolum L898_g6334 I 0.937
MhA1_Contig1400.frz3.gene1 Meloidogyne hapla MhA1_Contig1400.frz3.gene1 N 0.904
NBR_0000982201 Nippostrongylus brasiliensis NBR_0000982201 I 0.941
nDi.2.2.2.g06479 Dirofilaria immitis nDi.2.2.2.g06479 N 0.913
NECAME_08769 Necator americanus NECAME_08769 I 0.941
OESDEN_12332 Oesophagostomum dentatum OESDEN_12332 I 0.942
OFLC_0001397801 Onchocerca flexuosa OFLC_0001397801 N 0.922
PPA11400 Pristionchus pacificus PPA11400 I 0.955
PTRK_0001628400 Parastrongyloides trichosuri PTRK_0001628400 N 0.902
RSKR_0000795800 Rhabditophanes kr3021 RSKR_0000795800 N 0.930
scaffold126-EXSNAP2012.44 Pristionchus exspectatus scaffold126-EXSNAP2012.44 N 0.863
scaffold251-EXSNAP2012.33 Pristionchus exspectatus scaffold251-EXSNAP2012.33 N 0.863
SMUV_0001084001 Syphacia muris SMUV_0001084001 I 0.948
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 N 0.922
SPAL_0001661800 Strongyloides papillosus SPAL_0001661800 N 0.909
SSTP_0000497600 Strongyloides stercoralis SSTP_0000497600 N 0.909
SVE_0126800 Strongyloides venezuelensis SVE_0126800 N 0.909
WBGene00240965 Onchocerca volvulus WBGene00240965 N 0.922
WUBG_01942 Wuchereria bancrofti WUBG_01942 N 0.916