GSMUA_Achr10G29600_001 (Musa acuminata)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 GSMUA_Achr10G29600_001 T173164_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.743 0.743
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.743 0.743
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.743 0.743
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.625 0.625
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.625 0.625
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.625 0.625
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.625 0.625
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.537 0.537
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.537 0.537
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.537 0.537
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.537 0.537
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.537 0.537
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.537 0.537
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.537 0.537
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.537 0.537
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.537 0.537
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P29600_001 E2F 21 85
GSMUA_Achr10P29600_001 E2F 161 239

Links

Other E2F family TFs
Other Musa acuminata TFs

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.000
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.000
Bo6g086740 Brassica oleracea Bo6g086740 I 0.000
Bo6g119120 Brassica oleracea Bo6g119120 I 0.000
Bo8g102870 Brassica oleracea Bo8g102870 I 0.000
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.000
Bra003780 Brassica rapa Bra003780 I 0.000
Bra031069 Brassica rapa Bra031069 I 0.000
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.000
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.000
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.000
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.000
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.000
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.000
ERF017 Arabidopsis thaliana AT1G19210 D 0.000
ERF018 Arabidopsis thaliana AT1G74930 D 0.000
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.000
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.000
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.000
F775_23111 Aegilops tauschii F775_23111 I 0.000
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.000
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.000
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.000
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.000
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.000
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.000
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.000
mgf017314m Mimulus guttatus mgf017314m N 0.000
mgf021940m Mimulus guttatus mgf021940m I 0.000
mgf024162m Mimulus guttatus mgf024162m I 0.000
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.000
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.000
OB06G15740 Oryza brachyantha OB06G15740 N 0.000
OB08G24280 Oryza brachyantha OB08G24280 I 0.000
OBART08G16950 Oryza barthii OBART08G16950 I 0.000
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.000
OGLUM06G08330 Oryza glumaepatula OGLUM06G08330 N 0.000
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.000
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.000
OMERI06G09430 Oryza meridionalis OMERI06G09430 N 0.000
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.000
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.000
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.000
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.000
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.000
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.000
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.000
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.000
OS08G0454000 Oryza sativa OS08G0454000 I 0.000
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.000
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.000
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.000
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.000
PGSC0003DMG400023295 Solanum tuberosum PGSC0003DMG400023295 N 0.000
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.000
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.000
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.000
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.000
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.000
Si008104m.g Setaria italica Si008104m.g I 0.000
Si015027m.g Setaria italica Si015027m.g I 0.000
Si019636m.g Setaria italica Si019636m.g I 0.000
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.000
Solyc07g042230.1 Solanum lycopersicum Solyc07g042230.1 N 0.000
TCM_037486 Theobroma cacao TCM_037486 I 0.000
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.000
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.000
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.000