OB02G38920 (Oryza brachyantha)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02319 (E2F_TDP) IPR003316 OB02G38920 T173306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.757 0.757
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.757 0.757
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.757 0.757
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.647 0.647
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.647 0.647
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.647 0.647
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.647 0.647
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.574 0.574
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.574 0.574
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.574 0.574
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.574 0.574
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.574 0.574
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.574 0.574
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.566 0.566
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.566 0.566
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.566 0.566
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G38920.1 E2F 62 126
OB02G38920.1 E2F 206 285

Links

Other E2F family TFs
Other Oryza brachyantha TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_008900 Aspergillus clavatus CADACLAG00000976 I 0.000
AFUA_5G05600 Aspergillus fumigatus CADAFUAG00006210 I 0.000
ANIA_08858 Aspergillus nidulans CADANIAG00006192 I 0.000
ATEG_09469 Aspergillus terreus CADATEAG00006001 I 0.000
AUEXF2481DRAFT_3444 Aureobasidium subglaciale AUEXF2481DRAFT_3444 I 0.000
Bcin03g02390 Botrytis cinerea Bcin03g02390 I 0.000
CADAFLAG00010803 Aspergillus flavus CADAFLAG00010803 I 0.000
CADAORAG00004109 Aspergillus oryzae CADAORAG00004109 I 0.000
CANTEDRAFT_132311 Candida tenuis CANTEDRAFT_132311 I 0.000
CaO19.12316 Candida albicans CaO19.12316 I 0.000
CaO19.4853 Candida albicans CaO19.4853 I 0.000
CD36_09290 Candida dubliniensis CD36_09290 I 0.000
CGGC5_1850 Colletotrichum gloeosporioides CGGC5_1850 I 0.000
CH063_10052 Colletotrichum higginsianum CH063_10052 I 0.000
CHGG_03283 Chaetomium globosum CHGG_03283 I 0.000
CLUG_00244 Candida lusitaniae CLUG_00244 N 0.000
CLUG_00244 Clavispora lusitaniae CLUG_00244 N 0.000
Cob_10099 Colletotrichum orbiculare Cob_10099 I 0.000
CORT_0A03490 Candida orthopsilosis CORT_0A03490 I 0.000
CPAG_02650 Candida parapsilosis CPAG_02650 I 0.000
CSUB01_05644 Colletotrichum sublineola CSUB01_05644 I 0.000
CTHT_0023230 Chaetomium thermophilum CTHT_0023230 I 0.000
CTRG_03373 Candida tropicalis CTRG_03373 I 0.000
DEHA2F11308g Debaryomyces hansenii DEHA2F11308g I 0.000
ENSONIG00000016969 Oreochromis niloticus ENSONIG00000016969 I 0.000
ENSPFOG00000016968 Poecilia formosa ENSPFOG00000016968 I 0.000
ENSXMAG00000012880 Xiphophorus maculatus ENSXMAG00000012880 I 0.000
EURHEDRAFT_407493 Aspergillus ruber EURHEDRAFT_407493 I 0.000
EV44_g6121 Erysiphe necator EV44_g6121 I 0.000
e_gww1.1.2.693.1 Pichia stipitis e_gww1.1.2.693.1 N 0.000
fgenesh1_pg.00162_#_217 Aspergillus carbonarius fgenesh1_pg.00162_#_217 I 0.000
fgenesh2_pg.C_scaffold_5000694 Neurospora discreta fgenesh2_pg.C_scaffold_5000694 I 0.000
foxi2.L Xenopus laevis XB-GENE-6255082 I 0.000
G210_5562 Candida maltosa G210_5562 N 0.000
GB40150 Apis mellifera GB40150 I 0.000
GLRG_00119 Colletotrichum graminicola GLRG_00119 I 0.000
GNLVRS01_PISO0K10196g Millerozyma farinosa GNLVRS01_PISO0K10196g N 0.000
GNLVRS01_PISO0L10197g Millerozyma farinosa GNLVRS01_PISO0L10197g N 0.000
GSTUM_00006159001 Tuber melanosporum GSTUM_00006159001 I 0.000
HHAL002628-PA Halyomorpha halys HHAL002628-PA I 0.000
KLLA0_C08778g Kluyveromyces lactis KLLA0_C08778g N 0.000
KLTH0A06534g Lachancea thermotolerans KLTH0A06534g I 0.000
KLTH0A06534g Kluyveromyces thermotolerans KLTH0A06534g I 0.000
Kpol_1028p47 Vanderwaltozyma polyspora Kpol_1028p47 I 0.000
KUCA_T00001016001 Kuraishia capsulata KUCA_T00001016001 I 0.000
L798_02862 Zootermopsis nevadensis L798_02862 I 0.000
LALA0_S02e07250g Lachancea lanzarotensis LALA0_S02e07250g I 0.000
LELG_00412 Lodderomyces elongisporus LELG_00412 I 0.000
M437DRAFT_81025 Aureobasidium melanogenum M437DRAFT_81025 I 0.000
M438DRAFT_10900 Aureobasidium pullulans M438DRAFT_10900 I 0.000
MBM_03132 Marssonina brunnea MBM_03132 I 0.000
MPH_06970 Macrophomina phaseolina MPH_06970 I 0.000
MYCTH_2305050 Myceliophthora thermophila MYCTH_2305050 I 0.000
NCU06173 Neurospora crassa NCU06173 D 0.000
NEUTE1DRAFT_81248 Neurospora tetrasperma NEUTE1DRAFT_81248 I 0.000
NFIA_037450 Neosartorya fischeri CADNFIAG00003777 I 0.000
NV18361 Nasonia vitripennis NV18361 I 0.000
OIDMADRAFT_135267 Oidiodendron maius OIDMADRAFT_135267 I 0.000
Pc20g00650 Penicillium chrysogenum Pc20g00650 I 0.000
PCH_Pc20g00650 Penicillium rubens PCH_Pc20g00650 I 0.000
PDE_02308 Penicillium oxalicum PDE_02308 I 0.000
PDIP_22270 Penicillium digitatum PDIP_22270 I 0.000
PGUG_03609 Meyerozyma guilliermondii PGUG_03609 I 0.000
PICST_53324 Scheffersomyces stipitis PICST_53324 N 0.000
PITC_087800 Penicillium italicum PITC_087800 I 0.000
PODANS_7_8160 Podospora anserina PODANS_7_8160 I 0.000
PredSwiss_ASS2010_3214.2 Pneumocystis carinii PredSwiss_ASS2010_3214.2 I 0.000
PredSwiss_CON281.1 Pneumocystis carinii PredSwiss_CON281.1 I 0.000
PredSwiss_EST794.1 Pneumocystis carinii PredSwiss_EST794.1 I 0.000
PVAR5_4466 Byssochlamys spectabilis PVAR5_4466 I 0.000
Sakowv30031469m.g Saccoglossus kowalevskii Sakowv30031469m.g I 0.000
SBOR_6605 Sclerotinia borealis SBOR_6605 I 0.000
sep1 Schizosaccharomyces pombe SPBC4C3.12 I 0.000
SMAC_05348 Sordaria macrospora SMAC_05348 I 0.000
SNAPOd2T00016009001 Oikopleura dioica SNAPOd2T00016009001 I 0.000
SOCG_00186 Schizosaccharomyces octosporus SOCG_00186 I 0.000
SPAPADRAFT_68220 Spathaspora passalidarum SPAPADRAFT_68220 N 0.000
SPOG_02771 Schizosaccharomyces cryophilus SPOG_02771 I 0.000
SS1G_00580 Sclerotinia sclerotiorum SS1G_00580 I 0.000
TC010836 Tribolium castaneum TC010836 I 0.000
THITE_2118774 Thielavia terrestris THITE_2118774 I 0.000
U727_00430251281 Penicillium solitum U727_00430251281 I 0.000
UCRNP2_7609 Neofusicoccum parvum UCRNP2_7609 I 0.000
ZBAI_02769 Zygosaccharomyces bailii ZBAI_02769 I 0.000
ZBAI_09018 Zygosaccharomyces bailii ZBAI_09018 I 0.000