Pvit_10252 (Pogona vitticeps)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Pvit_10252 T173776_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.941 0.941
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.941 0.941
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.941 0.941
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.941 0.941
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.941 0.941
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.941 0.941
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.801 0.801
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.801 0.801
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.801 0.801
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.603 0.603
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.603 0.603
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.603 0.603
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.529 0.529
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.529 0.529
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.529 0.529
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.529 0.529
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_10252 E2F 139 207
Pvit_10252 E2F 278 362

Links

Other E2F family TFs
Other Pogona vitticeps TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.000
BGIOSGA004701 Oryza indica BGIOSGA004701 N 0.000
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.000
BGIOSGA036760 Oryza indica BGIOSGA036760 N 0.000
Bo3g035140 Brassica oleracea Bo3g035140 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bra000203 Brassica rapa Bra000203 I 0.000
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.000
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I 0.000
Cla021486 Citrullus lanatus Cla021486 I 0.000
Cucsa.259110 Cucumis sativus Cucsa.259110 I 0.000
evm.TU.supercontig_180.9 Carica papaya evm.TU.supercontig_180.9 I 0.000
F775_02479 Aegilops tauschii F775_02479 N 0.000
F775_04954 Aegilops tauschii F775_04954 N 0.000
F775_22564 Aegilops tauschii F775_22564 I 0.000
F775_23182 Aegilops tauschii F775_23182 I 0.000
F775_23296 Aegilops tauschii F775_23296 N 0.000
gene19019-v1.0-hybrid Fragaria vesca gene19019-v1.0-hybrid I 0.000
Gorai.003G085500 Gossypium raimondii Gorai.003G085500 I 0.000
Gorai.004G160100 Gossypium raimondii Gorai.004G160100 I 0.000
Gorai.008G250300 Gossypium raimondii Gorai.008G250300 I 0.000
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.000
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.000
GRMZM2G065290 Zea mays GRMZM2G065290 I 0.000
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.000
GRMZM2G382350 Zea mays GRMZM2G382350 I 0.000
GRMZM2G400559 Zea mays GRMZM2G400559 N 0.000
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR01G30470 Leersia perrieri LPERR01G30470 N 0.000
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.000
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.000
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.000
MLOC_6114 Hordeum vulgare MLOC_6114 I 0.000
MLOC_66612 Hordeum vulgare MLOC_66612 I 0.000
MTR_8g096730 Medicago truncatula MTR_8g096730 I 0.000
OB01G44130 Oryza brachyantha OB01G44130 I 0.000
OB01G44140 Oryza brachyantha OB01G44140 I 0.000
OBART01G35280 Oryza barthii OBART01G35280 N 0.000
OBART01G35310 Oryza barthii OBART01G35310 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OBART10G05920 Oryza barthii OBART10G05920 N 0.000
OBART12G00800 Oryza barthii OBART12G00800 N 0.000
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.000
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.000
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N 0.000
OLONG_000628 Oryza longistaminata OLONG_000628 N 0.000
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.000
OLONG_027124 Oryza longistaminata OLONG_027124 I 0.000
OLONG_028722 Oryza longistaminata OLONG_028722 N 0.000
OMERI01G32440 Oryza meridionalis OMERI01G32440 N 0.000
OMERI01G32480 Oryza meridionalis OMERI01G32480 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.000
OMERI12G00120 Oryza meridionalis OMERI12G00120 N 0.000
ONIVA01G40310 Oryza nivara ONIVA01G40310 N 0.000
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.000
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.000
ONIVA12G00800 Oryza nivara ONIVA12G00800 N 0.000
OPUNC01G34260 Oryza punctata OPUNC01G34260 N 0.000
OPUNC01G34270 Oryza punctata OPUNC01G34270 N 0.000
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.000
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.000
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.000
OPUNC12G00950 Oryza punctata OPUNC12G00950 N 0.000
ORGLA01G0291600 Oryza glaberrima ORGLA01G0291600 N 0.000
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.000
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.000
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.000
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N 0.000
ORUFI01G38630 Oryza rufipogon ORUFI01G38630 N 0.000
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.000
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.000
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N 0.000
OS01G0820400 Oryza sativa OS01G0820400 N 0.000
OS01G0820700 Oryza sativa OS01G0820700 I 0.000
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N 0.000
Pavir.Ea03257 Panicum virgatum Pavir.Ea03257 I 0.000
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I 0.000
Pavir.Eb03562 Panicum virgatum Pavir.Eb03562 I 0.000
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.000
Pavir.J31756 Panicum virgatum Pavir.J31756 I 0.000
Pavir.J37617 Panicum virgatum Pavir.J37617 N 0.000
Pavir.J38024 Panicum virgatum Pavir.J38024 N 0.000
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.000
Sb03g038170 Sorghum bicolor Sb03g038170 I 0.000
Sb03g038180 Sorghum bicolor Sb03g038180 I 0.000
Sb03g038200 Sorghum bicolor Sb03g038200 N 0.000
Si002121m.g Setaria italica Si002121m.g I 0.000
Si004791m.g Setaria italica Si004791m.g I 0.000
Si005138m.g Setaria italica Si005138m.g N 0.000
Si012735m.g Setaria italica Si012735m.g I 0.000
Si039519m.g Setaria italica Si039519m.g N 0.000
TCM_016343 Theobroma cacao TCM_016343 I 0.000
TRAES3BF081400030CFD_g Triticum aestivum TRAES3BF081400030CFD_g I 0.000
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.000
Traes_3B_8B0D448D8 Triticum aestivum Traes_3B_8B0D448D8 I 0.000
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.000
Traes_3DL_7456F61A3 Triticum aestivum Traes_3DL_7456F61A3 N 0.000
TRIUR3_16097 Triticum urartu TRIUR3_16097 N 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000
TRIUR3_27575 Triticum urartu TRIUR3_27575 I 0.000
TRIUR3_31234 Triticum urartu TRIUR3_31234 N 0.000