CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bra000528 *(Brassica rapa)* EIN3
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF04873 (EIN3)	IPR006957	Bra000528	T175018_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
EIL1 M00724_2.00	Arabidopsis thaliana	NNVRTDMRN	NYKHAYBNN	PBM Chang et al.(2013) pTH7932	0.923	0.923
EIN3 M00725_2.00	Arabidopsis thaliana	NNRTDHAYNN	NNRTDHAYNN	PBM Chang et al.(2013) pTH8729	0.883	0.883
EIN3 M06878_2.00	Arabidopsis thaliana	GDMYANRTWCAWTGH	DCAWTGWAYNTRKHC	Dap-seq OMalley et al.(2016) EIN3_col_a	0.883	0.883
EIN3 M06879_2.00	Arabidopsis thaliana	RCCGTTR	YAACGGY	Dap-seq OMalley et al.(2016) EIN3_colamp_a	0.883	0.883
Q9ZWK1_TOBAC M10470_2.00	Nicotiana tabacum	AGRTWCAT	ATGWAYCT	Transfac Matys et al.(2006) P$TEIL_01	0.879	0.879
e_gw1.87.73.1 M00726_2.00	Physcomitrella patens	NNNRTDCDBN	NVHGHAYNNN	PBM Chang et al.(2013) pTH8479	0.827	0.827
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bra000528.1-P	EIN3	48	298	DELERRMWRDKMRLKRLKEQQSKCKEGVDASKQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQAENNIAGGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGREEWWPQLGLPSDQASPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE

Links
Other EIN3 family TFs
Other *Brassica rapa* TFs