POPTR_0003s22090 (Populus trichocarpa)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 POPTR_0003s22090 T175201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.830 0.830
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.830 0.830
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.798 0.798
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.725 0.725
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.725 0.725
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.700 0.700
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.700 0.700
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s22090.1 EIN3 38 285

Links

Other EIN3 family TFs
Other Populus trichocarpa TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29680.m001688 Ricinus communis 29680.m001688 I 0.000
AC203535.4_FG001 Zea mays AC203535.4_FG001 I 0.000
ALNC14_009350 Albugo laibachii ALNC14_009350 I 0.000
AMTR_s00067p00056670 Amborella trichopoda AMTR_s00067p00056670 I 0.000
Aquca_034_00352 Aquilegia coerulea Aquca_034_00352 I 0.000
ATCDC5 Arabidopsis lyrata fgenesh2_kg.1__1032__AT1G09770.1 I 0.000
BBA_00468 Beauveria bassiana BBA_00468 I 0.000
BGIOSGA016164 Oryza indica BGIOSGA016164 I 0.000
Bo5g010170 Brassica oleracea Bo5g010170 I 0.000
Bo8g058860 Brassica oleracea Bo8g058860 I 0.000
Bostr.25494s0035 Boechera stricta Bostr.25494s0035 I 0.000
Bra019993 Brassica rapa Bra019993 I 0.000
Bra030798 Brassica rapa Bra030798 I 0.000
BRADI4G07110 Brachypodium distachyon BRADI4G07110 I 0.000
BXY_0883400 Bursaphelenchus xylophilus BXY_0883400 I 0.000
Cagra.4395s0161 Capsella grandiflora Cagra.4395s0161 I 0.000
Carubv10008427m.g Capsella rubella Carubv10008427m.g I 0.000
cassava44087.valid.m1 Manihot esculenta cassava44087.valid.m1 I 0.000
cassava4988.m1 Manihot esculenta cassava4988.m1 I 0.000
Ca_01258 Cicer arietinum Ca_01258 I 0.000
CDC5 Arabidopsis thaliana AT1G09770 D 0.000
CHLREDRAFT_129649 Chlamydomonas reinhardtii CHLREDRAFT_129649 I 0.000
chr1.CM0600.100.nd Lotus japonicus chr1.CM0600.100.nd I 0.000
Ciclev10018691m.g Citrus clementina Ciclev10018691m.g I 0.000
Cla000798 Citrullus lanatus Cla000798 I 0.000
Contig21598.0.g16 Oxytricha trifallax Contig21598.0.g16 I 0.000
CPUR_07562 Claviceps purpurea CPUR_07562 I 0.000
Cucsa.106050 Cucumis sativus Cucsa.106050 I 0.000
Cucsa.291780 Cucumis sativus Cucsa.291780 I 0.000
DOTSEDRAFT_74195 Dothistroma septosporum DOTSEDRAFT_74195 I 0.000
ENSCING00000007995 Ciona intestinalis ENSCING00000007995 I 0.000
ENSCSAVG00000010518 Ciona savignyi ENSCSAVG00000010518 I 0.000
estExt_fgenesh1_pg.C_140143 Phytophthora capsici estExt_fgenesh1_pg.C_140143 I 0.000
estExt_fgenesh2_pg.C_160008 Monosiga brevicollis estExt_fgenesh2_pg.C_160008 I 0.000
estExt_fgenesh4_pg.C_570064 Volvox carteri estExt_fgenesh4_pg.C_570064 I 0.000
estExt_fgeneshCV_pg.C_60186 Chlorella vulgaris estExt_fgeneshCV_pg.C_60186 I 0.000
estExt_Genemark1.C_60286 Coccomyxa subellipsoidea C169 estExt_Genemark1.C_60286 I 0.000
estExt_Genewise1.C_230192 Bigelowiella natans estExt_Genewise1.C_230192 I 0.000
estExt_Genewise1.C_6410001 Physcomitrella patens estExt_Genewise1.C_6410001 I 0.000
estExt_Genewise1Plus.C_10250 Chlorella NC64A estExt_Genewise1Plus.C_10250 I 0.000
estExt_Genewise1Plus.C_20699 Micromonas pusilla estExt_Genewise1Plus.C_20699 I 0.000
estExt_Genewise1Plus.C_chr_91101 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_91101 I 0.000
estExt_Genewise2Plus.C_Chr_010477 Micromonas sp RCC299 estExt_Genewise2Plus.C_Chr_010477 I 0.000
ETH_00021465 Eimeria tenella ETH_00021465 N 0.000
Eucgr.B01570 Eucalyptus grandis Eucgr.B01570 I 0.000
evm.TU.supercontig_306.1 Carica papaya evm.TU.supercontig_306.1 I 0.000
e_gw1.05.00.32.1 Ostreococcus tauri e_gw1.05.00.32.1 I 0.000
e_gw1.3.682.1 Mycosphaerella fijiensis e_gw1.3.682.1 I 0.000
e_gw2.01.888.1 Micromonas sp RCC299 e_gw2.01.888.1 I 0.000
F443_00813 Phytophthora parasitica F443_00813 I 0.000
F775_02173 Aegilops tauschii F775_02173 I 0.000
F775_07681 Aegilops tauschii F775_07681 I 0.000
fgeneshDP_pg.C_scaffold_81000005 Dictyostelium purpureum fgeneshDP_pg.C_scaffold_81000005 N 0.000
fgeneshHS_kg.scaffold_62000007 Naegleria gruberi fgeneshHS_kg.scaffold_62000007 I 0.000
fgenesh_scip_prom.46568.4683 Phytophthora kernoviae fgenesh_scip_prom.46568.4683 I 0.000
gene16655-v1.0-hybrid Fragaria vesca gene16655-v1.0-hybrid I 0.000
GLYMA10G30870 Glycine max GLYMA10G30870 I 0.000
GLYMA20G36600 Glycine max GLYMA20G36600 I 0.000
Gorai.007G276500 Gossypium raimondii Gorai.007G276500 I 0.000
Gorai.013G187200 Gossypium raimondii Gorai.013G187200 I 0.000
GSMUA_Achr9G23340_001 Musa acuminata GSMUA_Achr9G23340_001 I 0.000
GSPATT00020891001 Paramecium tetraurelia GSPATT00020891001 I 0.000
GUITHDRAFT_164718 Guillardia theta GUITHDRAFT_164718 I 0.000
HpaG807540 Hyaloperonospora arabidopsidis HpaG807540 I 0.000
LPERR04G05540 Leersia perrieri LPERR04G05540 I 0.000
Lus10034133.g Linum usitatissimum Lus10034133.g I 0.000
Lus10043451.g Linum usitatissimum Lus10043451.g I 0.000
maker-pir_contig_80-snap-gene-0.40 Pythium irregulare maker-pir_contig_80-snap-gene-0.40 I 0.000
maker-pve_contig_89-fgenesh-gene-0.16 Pythium vexans maker-pve_contig_89-fgenesh-gene-0.16 I 0.000
MDP0000151195 Malus domestica MDP0000151195 I 0.000
MDP0000191083 Malus domestica MDP0000191083 I 0.000
MDP0000878701 Malus domestica MDP0000878701 I 0.000
mgf002270m Mimulus guttatus mgf002270m I 0.000
MhA1_Contig70.frz3.gene35 Meloidogyne hapla MhA1_Contig70.frz3.gene35 I 0.000
MTR_7g115550 Medicago truncatula MTR_7g115550 I 0.000
MYCFIDRAFT_30809 Pseudocercospora fijiensis MYCFIDRAFT_30809 I 0.000
Mycgr3G75916 Zymoseptoria tritici Mycgr3G75916 I 0.000
O9G_003647 Rozella allomycis O9G_003647 I 0.000
OB04G16480 Oryza brachyantha OB04G16480 I 0.000
OBART04G08350 Oryza barthii OBART04G08350 I 0.000
OGLUM04G08300 Oryza glumaepatula OGLUM04G08300 I 0.000
OLONG_016730 Oryza longistaminata OLONG_016730 I 0.000
OMERI04G07710 Oryza meridionalis OMERI04G07710 I 0.000
ONIVA04G06780 Oryza nivara ONIVA04G06780 I 0.000
OPUNC04G06960 Oryza punctata OPUNC04G06960 I 0.000
orange1.1g047012m.g Citrus sinensis orange1.1g047012m.g I 0.000
ORUFI04G09590 Oryza rufipogon ORUFI04G09590 I 0.000
OS04G0348300 Oryza sativa OS04G0348300 I 0.000
Pavir.Ca02612 Panicum virgatum Pavir.Ca02612 I 0.000
Pavir.Ga02351 Panicum virgatum Pavir.Ga02351 I 0.000
Pavir.J36679 Panicum virgatum Pavir.J36679 I 0.000
PGSC0003DMG400011500 Solanum tuberosum PGSC0003DMG400011500 I 0.000
Phyra52118 Phytophthora ramorum Phyra52118 I 0.000
Physo127490 Phytophthora sojae Physo127490 I 0.000
PITG_01528 Phytophthora infestans PITG_01528 I 0.000
PK01704.1 Cannabis sativa PK01704.1 I 0.000
Pm003587 Prunus mume Pm003587 I 0.000
POPTR_0013s04340 Populus trichocarpa POPTR_0013s04340 I 0.000
POPTR_0019s03520 Populus trichocarpa POPTR_0019s03520 I 0.000
PRUPE_ppa000753mg Prunus persica PRUPE_ppa000753mg I 0.000
PYU1_G012024 Pythium ultimum PYU1_G012024 I 0.000
SapurV1A.0309s0270 Salix purpurea SapurV1A.0309s0270 I 0.000
SapurV1A.0483s0120 Salix purpurea SapurV1A.0483s0120 I 0.000
SapurV1A.0816s0150 Salix purpurea SapurV1A.0816s0150 I 0.000
Sb03g044450 Sorghum bicolor Sb03g044450 I 0.000
Sb08g015280 Sorghum bicolor Sb08g015280 I 0.000
SELMODRAFT_113921 Selaginella moellendorffii SELMODRAFT_113921 I 0.000
SELMODRAFT_116436 Selaginella moellendorffii SELMODRAFT_116436 I 0.000
SELMODRAFT_179572 Selaginella moellendorffii SELMODRAFT_179572 I 0.000
SELMODRAFT_233652 Selaginella moellendorffii SELMODRAFT_233652 I 0.000
SEPMUDRAFT_151351 Sphaerulina musiva SEPMUDRAFT_151351 I 0.000
Si009268m.g Setaria italica Si009268m.g I 0.000
Si021096m.g Setaria italica Si021096m.g I 0.000
SNAPOd2T00000694001 Oikopleura dioica SNAPOd2T00000694001 I 0.000
Solyc04g009950.2 Solanum lycopersicum Solyc04g009950.2 I 0.000
SPRG_05174 Saprolegnia parasitica SPRG_05174 I 0.000
TCM_026195 Theobroma cacao TCM_026195 I 0.000
Thhalv10001097m.g Eutrema salsugineum Thhalv10001097m.g I 0.000
Thhalv10006800m.g Eutrema salsugineum Thhalv10006800m.g I 0.000
TRIATDRAFT_33700 Trichoderma atroviride TRIATDRAFT_33700 I 0.000
TRIUR3_09033 Triticum urartu TRIUR3_09033 I 0.000
TRIUR3_30901 Triticum urartu TRIUR3_30901 I 0.000
TTHERM_01035770 Tetrahymena thermophila TTHERM_01035770 N 0.000
VHEMI03471 Torrubiella hemipterigena VHEMI03471 I 0.000
YALI0_D20086g Yarrowia lipolytica YALI0_D20086g N 0.000