gene20650-v1.0-hybrid (Fragaria vesca)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 gene20650-v1.0-hybrid T175352_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.830 0.830
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.830 0.830
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.806 0.806
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.737 0.737
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.713 0.713
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.704 0.704
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.704 0.704
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.704 0.704
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna20650.1-v1.0-hybrid EIN3 37 284

Links

Other EIN3 family TFs
Other Fragaria vesca TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.000
BGIOSGA004705 Oryza indica BGIOSGA004705 I 0.000
BGIOSGA017556 Oryza indica BGIOSGA017556 I 0.000
BGIOSGA034612 Oryza indica BGIOSGA034612 I 0.000
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.000
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.000
BRADI2G53500 Brachypodium distachyon BRADI2G53500 N 0.000
BRADI2G53520 Brachypodium distachyon BRADI2G53520 I 0.000
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.000
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I 0.000
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.000
F775_02479 Aegilops tauschii F775_02479 N 0.000
F775_02480 Aegilops tauschii F775_02480 N 0.000
F775_03184 Aegilops tauschii F775_03184 I 0.000
F775_04232 Aegilops tauschii F775_04232 N 0.000
F775_04954 Aegilops tauschii F775_04954 N 0.000
F775_23182 Aegilops tauschii F775_23182 I 0.000
GRMZM2G059562 Zea mays GRMZM2G059562 I 0.000
GRMZM2G169564 Zea mays GRMZM2G169564 N 0.000
GRMZM2G400559 Zea mays GRMZM2G400559 N 0.000
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.000
LPERR11G00960 Leersia perrieri LPERR11G00960 I 0.000
LPERR11G00970 Leersia perrieri LPERR11G00970 N 0.000
LPERR12G01080 Leersia perrieri LPERR12G01080 N 0.000
OB01G44140 Oryza brachyantha OB01G44140 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB11G10760 Oryza brachyantha OB11G10760 N 0.000
OB12G11030 Oryza brachyantha OB12G11030 N 0.000
OBART01G35380 Oryza barthii OBART01G35380 I 0.000
OBART05G08130 Oryza barthii OBART05G08130 I 0.000
OBART11G01110 Oryza barthii OBART11G01110 I 0.000
OBART12G00850 Oryza barthii OBART12G00850 N 0.000
OGLUM01G39390 Oryza glumaepatula OGLUM01G39390 I 0.000
OGLUM05G08540 Oryza glumaepatula OGLUM05G08540 I 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OGLUM11G00870 Oryza glumaepatula OGLUM11G00870 I 0.000
OLONG_000636 Oryza longistaminata OLONG_000636 I 0.000
OLONG_019907 Oryza longistaminata OLONG_019907 I 0.000
OMERI01G32510 Oryza meridionalis OMERI01G32510 I 0.000
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.000
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.000
ONIVA01G40390 Oryza nivara ONIVA01G40390 I 0.000
ONIVA05G08650 Oryza nivara ONIVA05G08650 I 0.000
ONIVA11G01240 Oryza nivara ONIVA11G01240 I 0.000
OPUNC01G34280 Oryza punctata OPUNC01G34280 I 0.000
OPUNC05G07410 Oryza punctata OPUNC05G07410 I 0.000
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.000
OPUNC11G00980 Oryza punctata OPUNC11G00980 N 0.000
OPUNC12G00990 Oryza punctata OPUNC12G00990 N 0.000
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.000
ORGLA01G0292200 Oryza glaberrima ORGLA01G0292200 I 0.000
ORGLA05G0070000 Oryza glaberrima ORGLA05G0070000 I 0.000
ORGLA11G0202000 Oryza glaberrima ORGLA11G0202000 I 0.000
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.000
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.000
ORUFI01G38690 Oryza rufipogon ORUFI01G38690 I 0.000
ORUFI05G08750 Oryza rufipogon ORUFI05G08750 I 0.000
OS01G0820700 Oryza sativa OS01G0820700 I 0.000
OS01G0821600 Oryza sativa OS01G0821600 I 0.000
OS11G0117500 Oryza sativa OS11G0117500 N 0.000
OS12G0116700 Oryza sativa OS12G0116700 N 0.000
Pavir.Ca00084 Panicum virgatum Pavir.Ca00084 N 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I 0.000
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.J09582 Panicum virgatum Pavir.J09582 N 0.000
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
Sb05g001220 Sorghum bicolor Sb05g001220 N 0.000
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.000
Si010764m.g Setaria italica Si010764m.g N 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
Si027574m.g Setaria italica Si027574m.g I 0.000
Si027876m.g Setaria italica Si027876m.g N 0.000
Si028202m.g Setaria italica Si028202m.g I 0.000
TRAES3BF001300030CFD_g Triticum aestivum TRAES3BF001300030CFD_g I 0.000
TRAES3BF005100010CFD_g Triticum aestivum TRAES3BF005100010CFD_g I 0.000
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.000
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.000
Traes_5AL_69A969FF4 Triticum aestivum Traes_5AL_69A969FF4 N 0.000
Traes_5BL_F853EA802 Triticum aestivum Traes_5BL_F853EA802 I 0.000
TRIUR3_01445 Triticum urartu TRIUR3_01445 N 0.000
TRIUR3_01447 Triticum urartu TRIUR3_01447 N 0.000
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.000
TRIUR3_16097 Triticum urartu TRIUR3_16097 N 0.000
TRIUR3_17401 Triticum urartu TRIUR3_17401 I 0.000
TRIUR3_20905 Triticum urartu TRIUR3_20905 N 0.000
TRIUR3_26571 Triticum urartu TRIUR3_26571 N 0.000
TRIUR3_31234 Triticum urartu TRIUR3_31234 N 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000