CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10008456m.g
(
Capsella rubella
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Carubv10008456m.g
T181268_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10008456m
FAR1
100
185
NYYNCYATEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGFKRINDVNRVRKETRTGCPAMIRMRQVDSKRWRVLEVTLDHNHLLGA
Links
Other
FAR1
family TFs
Other
Capsella rubella
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000007435
Astyanax mexicanus
ENSAMXG00000007435
N
ENSGACG00000010823
Gasterosteus aculeatus
ENSGACG00000010823
N
ENSGMOG00000013137
Gadus morhua
ENSGMOG00000013137
N
ENSGMOG00000017555
Gadus morhua
ENSGMOG00000017555
N
ENSONIG00000002589
Oreochromis niloticus
ENSONIG00000002589
N
ENSPFOG00000006142
Poecilia formosa
ENSPFOG00000006142
N
ENSPFOG00000017353
Poecilia formosa
ENSPFOG00000017353
N
ENSXMAG00000004943
Xiphophorus maculatus
ENSXMAG00000004943
N
ENSXMAG00000018118
Xiphophorus maculatus
ENSXMAG00000018118
N
znf710a
Danio rerio
ENSDARG00000014680
N
znf710a
Oryzias latipes
ENSORLG00000008229
N
znf710a
Takifugu rubripes
ENSTRUG00000006452
N
znf710b
Danio rerio
ENSDARG00000005549
N
znf710b
Gasterosteus aculeatus
ENSGACG00000016481
N
znf710b
Tetraodon nigroviridis
ENSTNIG00000011367
N
znf710b
Takifugu rubripes
ENSTRUG00000002213
N