orange1.1g005579m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g005579m.g T181619_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g005579m FAR1 71 163

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N 0.978
29758.m000681 Ricinus communis 29758.m000681 N 0.775
Bo2g152930 Brassica oleracea Bo2g152930 N 0.910
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N 0.921
Bra020611 Brassica rapa Bra020611 N 0.854
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N 0.910
Carubv10000250m.g Capsella rubella Carubv10000250m.g N 0.910
cassava40276.m1 Manihot esculenta cassava40276.m1 N 0.989
cassava40936.m1 Manihot esculenta cassava40936.m1 N 0.764
Ca_07896 Cicer arietinum Ca_07896 N 0.764
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N 0.753
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N 1.000
Cucsa.044640 Cucumis sativus Cucsa.044640 N 0.764
Cucsa.100320 Cucumis sativus Cucsa.100320 N 0.740
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N 0.775
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N 0.966
FRS10 Vitis vinifera VIT_12s0057g00960 N 1.000
FRS10 Populus trichocarpa POPTR_0014s16500 N 0.955
FRS10 Arabidopsis thaliana AT5G28530 N 0.910
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N 0.966
gene19817-v1.0-hybrid Fragaria vesca gene19817-v1.0-hybrid N 0.742
GLYMA09G01540 Glycine max GLYMA09G01540 N 0.775
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N 0.989
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N 0.787
MDP0000249284 Malus domestica MDP0000249284 N 0.764
mgf004308m Mimulus guttatus mgf004308m N 0.933
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N 0.753
PK07950.1 Cannabis sativa PK07950.1 N 0.764
PK09224.1 Cannabis sativa PK09224.1 N 0.989
Pm015052 Prunus mume Pm015052 N 0.978
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N 0.787
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N 0.775
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N 0.978
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N 0.955
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N 0.787
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N 0.989
TCM_020251 Theobroma cacao TCM_020251 N 1.000
TCM_030416 Theobroma cacao TCM_030416 N 0.787
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N 0.955
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N 0.775