CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCAS_0A11450
(
Naumovozyma castellii
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
NCAS_0A11450
T188154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FHL1
M00046_2.00
Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN
PBM
Badis et al.(2008)
FHL1_2086
0.806
0.927
FHL1
M01543_2.00
Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN
PBM
Zhu et al.(2009)
Fhl1
0.806
0.927
FHL1
M07475_2.00
Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1
0.806
0.927
FHL1
M08557_2.00
Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN
Misc
DeBoer et al.(2011)
YPR104C_808
0.806
0.927
KLLA0_F08206g
M01015_2.00
Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN
PBM
Nakagawa et al.(2013)
KLLA0F08206p
0.733
0.878
AGOS_AEL327W
M01004_2.00
Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN
PBM
Nakagawa et al.(2013)
AEL327Wp
0.704
0.890
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC67703
Forkhead
560
646
KPTFSYSAILTTCIRKYSSEKGMSLSEIYGGIRELFPYYKYCPDGWQSSVRHNLSLNKSFRKVSKEGKGWLWGLDEDYIAEREKQKK
Links
Other
Forkhead
family TFs
Other
Naumovozyma castellii
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.227127
Amphimedon queenslandica
Aqu1.227127
N
GLOINDRAFT_11824
Rhizophagus irregularis
GLOINDRAFT_11824
N
GLOINDRAFT_14813
Rhizophagus irregularis
GLOINDRAFT_14813
N
GLOINDRAFT_16563
Rhizophagus irregularis
GLOINDRAFT_16563
N
GLOINDRAFT_17166
Rhizophagus irregularis
GLOINDRAFT_17166
N
GLOINDRAFT_17167
Rhizophagus irregularis
GLOINDRAFT_17167
N
GLOINDRAFT_209293
Rhizophagus irregularis
GLOINDRAFT_209293
N
GLOINDRAFT_20940
Rhizophagus irregularis
GLOINDRAFT_20940
N
GLOINDRAFT_21291
Rhizophagus irregularis
GLOINDRAFT_21291
N
GLOINDRAFT_224210
Rhizophagus irregularis
GLOINDRAFT_224210
N
GLOINDRAFT_22824
Rhizophagus irregularis
GLOINDRAFT_22824
N
GLOINDRAFT_25683
Rhizophagus irregularis
GLOINDRAFT_25683
N
GLOINDRAFT_27042
Rhizophagus irregularis
GLOINDRAFT_27042
N
GLOINDRAFT_30036
Rhizophagus irregularis
GLOINDRAFT_30036
N
GLOINDRAFT_31849
Rhizophagus irregularis
GLOINDRAFT_31849
N
GLOINDRAFT_319204
Rhizophagus irregularis
GLOINDRAFT_319204
N
GLOINDRAFT_330944
Rhizophagus irregularis
GLOINDRAFT_330944
N
GLOINDRAFT_33465
Rhizophagus irregularis
GLOINDRAFT_33465
N
GLOINDRAFT_340908
Rhizophagus irregularis
GLOINDRAFT_340908
N
GLOINDRAFT_342377
Rhizophagus irregularis
GLOINDRAFT_342377
N
GLOINDRAFT_344515
Rhizophagus irregularis
GLOINDRAFT_344515
N
GLOINDRAFT_344841
Rhizophagus irregularis
GLOINDRAFT_344841
N
GLOINDRAFT_346927
Rhizophagus irregularis
GLOINDRAFT_346927
N
GLOINDRAFT_347004
Rhizophagus irregularis
GLOINDRAFT_347004
N
GLOINDRAFT_35671
Rhizophagus irregularis
GLOINDRAFT_35671
N
GLOINDRAFT_36163
Rhizophagus irregularis
GLOINDRAFT_36163
N
GLOINDRAFT_3645
Rhizophagus irregularis
GLOINDRAFT_3645
N
GLOINDRAFT_5627
Rhizophagus irregularis
GLOINDRAFT_5627
N
GLOINDRAFT_8155
Rhizophagus irregularis
GLOINDRAFT_8155
N
GLOINDRAFT_97805
Rhizophagus irregularis
GLOINDRAFT_97805
N