CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr14394
(
Ophisaurus gracilis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Ogr14394
T189187_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN
NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.821
0.907
FOXN1
M10531_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.782
0.884
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN
NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.782
0.872
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN
NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.773
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr14394
Forkhead
208
298
KPIYSYSCLIAMALKNSATGSLPVSEIYSFMKEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKMSGTSRKGCLWALNPAKIDKMEEEMQ
Links
Other
Forkhead
family TFs
Other
Ophisaurus gracilis
TFs
197 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29634.m002156
Ricinus communis
29634.m002156
N
0.000
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.000
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.000
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.000
chr3.CM0127.460.nc
Lotus japonicus
chr3.CM0127.460.nc
N
0.000
Cla014744
Citrullus lanatus
Cla014744
N
0.000
Cucsa.127390
Cucumis sativus
Cucsa.127390
N
0.000
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.000
Eucgr.I02451
Eucalyptus grandis
Eucgr.I02451
N
0.000
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.000
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.000
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.000
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.000
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.000
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.000
mgf021185m
Mimulus guttatus
mgf021185m
N
0.000
PK13108.1
Cannabis sativa
PK13108.1
N
0.000
Pm026616
Prunus mume
Pm026616
N
0.000
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.000
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.000
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.000
SapurV1A.0254s0130
Salix purpurea
SapurV1A.0254s0130
N
0.000
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.000
SapurV1A.4211s0010
Salix purpurea
SapurV1A.4211s0010
N
0.000
TCM_000399
Theobroma cacao
TCM_000399
N
0.000
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.000