Bra036854 (Brassica rapa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 Bra036854 T191984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036854.1-P GATA 150 185

Links

Other GATA family TFs
Other Brassica rapa TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007727 Calypte anna Aan_R007727 I
Afo_R009492 Aptenodytes forsteri Afo_R009492 I
Alligator_sinensis_CCG007004.1 Alligator sinensis Alligator_sinensis_CCG007004.1 I
ATOH7 Ornithorhynchus anatinus ENSOANG00000001952 I
ATOH7 Loxodonta africana ENSLAFG00000012951 I
ATOH7 Tursiops truncatus ENSTTRG00000013318 I
ATOH7 Meleagris gallopavo ENSMGAG00000015321 I
ATOH7 Macaca mulatta ENSMMUG00000015131 I
ATOH7 Monodelphis domestica ENSMODG00000017280 I
atoh7 Takifugu rubripes ENSTRUG00000017954 I
Atoh7 Mus musculus ENSMUSG00000036816 I
atoh7 Tetraodon nigroviridis ENSTNIG00000013093 I
ATOH7 Gorilla gorilla ENSGGOG00000016464 I
ATOH7 Taeniopygia guttata ENSTGUG00000003584 I
ATOH7 Otolemur garnettii ENSOGAG00000000980 I
ATOH7 Sus scrofa ENSSSCG00000021995 I
atoh7 Oryzias latipes ENSORLG00000013722 I
ATOH7 Pteropus vampyrus ENSPVAG00000008035 I
ATOH7 Pan troglodytes ENSPTRG00000002551 I
ATOH7 Vicugna pacos ENSVPAG00000011811 I
ATOH7 Gallus gallus ENSGALG00000003931 I
atoh7 Gasterosteus aculeatus ENSGACG00000003390 I
ATOH7 Homo sapiens ENSG00000179774 D
ATOH7 Felis catus ENSFCAG00000003425 I
ATOH7 Echinops telfairi ENSETEG00000014608 I
ATOH7 Dasypus novemcinctus ENSDNOG00000048556 I
atoh7 Danio rerio ENSDARG00000069552 I
ATOH7 Callithrix jacchus ENSCJAG00000022261 I
ATOH7 Choloepus hoffmanni ENSCHOG00000013736 I
ATOH7 Canis familiaris ENSCAFG00000013555 I
ATOH7 Bos taurus ENSBTAG00000017521 I
atoh7 Xenopus tropicalis XB-GENE-989022 I
ATOH7 Anolis carolinensis ENSACAG00000010441 I
atoh7.L Xenopus laevis XB-GENE-989023 I
atoh7.S Xenopus laevis XB-GENE-6252646 I
Brh_R011172 Buceros rhinoceros Brh_R011172 I
Cmyd_10012128 Chelonia mydas Cmyd_10012128 I
ENSAMEG00000019067 Ailuropoda melanoleuca ENSAMEG00000019067 I
ENSAMXG00000025967 Astyanax mexicanus ENSAMXG00000025967 I
ENSAPLG00000000737 Anas platyrhynchos ENSAPLG00000000737 I
ENSCSAG00000018432 Chlorocebus sabaeus ENSCSAG00000018432 I
ENSFALG00000014082 Ficedula albicollis ENSFALG00000014082 I
ENSLACG00000017485 Latimeria chalumnae ENSLACG00000017485 I
ENSLOCG00000018251 Lepisosteus oculatus ENSLOCG00000018251 I
ENSMPUG00000018542 Mustela putorius furo ENSMPUG00000018542 I
ENSNLEG00000018622 Nomascus leucogenys ENSNLEG00000018622 I
ENSOARG00000004935 Ovis aries ENSOARG00000004935 I
ENSONIG00000010284 Oreochromis niloticus ENSONIG00000010284 I
ENSP00000362777 Macaca fascicularis ENSP00000362777 I
ENSP00000362777-D1 Bos grunniens ENSP00000362777-D1 I
ENSPANG00000008840 Papio anubis ENSPANG00000008840 I
ENSPFOG00000020278 Poecilia formosa ENSPFOG00000020278 I
ENSPSIG00000000814 Pelodiscus sinensis ENSPSIG00000000814 I
ENSSTOG00000023613 Ictidomys tridecemlineatus ENSSTOG00000023613 I
ENSXMAG00000019829 Xiphophorus maculatus ENSXMAG00000019829 I
Gfo_R013988 Geospiza fortis Gfo_R013988 I
Ogr07245 Ophisaurus gracilis Ogr07245 I
Pvit_00553 Pogona vitticeps Pvit_00553 I
Tal_R012797 Tyto alba Tal_R012797 I