CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s03120
(
Populus trichocarpa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
POPTR_0007s03120
T194889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s03120.1
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
POPTR_0007s03120.2
GATA
214
251
CQHCGISAKDTPAMRRGPAGPRTLCNACGLMWANKGTL
Links
Other
GATA
family TFs
Other
Populus trichocarpa
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_081150
Aspergillus clavatus
CADACLAG00008209
N
AFUA_2G09330
Aspergillus fumigatus
CADAFUAG00004369
N
CADAFLAG00005898
Aspergillus flavus
CADAFLAG00005898
N
CADANGAG00009940
Aspergillus niger
CADANGAG00009940
N
EURHEDRAFT_452238
Aspergillus ruber
EURHEDRAFT_452238
N
fgenesh1_pg.00772_#_141
Aspergillus carbonarius
fgenesh1_pg.00772_#_141
N
Pc16g11120
Penicillium chrysogenum
Pc16g11120
N
PCH_Pc16g11120
Penicillium rubens
PCH_Pc16g11120
N
PDE_04311
Penicillium oxalicum
PDE_04311
N
PDIP_19380
Penicillium digitatum
PDIP_19380
N
PEX1_057680
Penicillium expansum
PEX1_057680
N
PITC_079690
Penicillium italicum
PITC_079690
N
U727_00431181291
Penicillium solitum
U727_00431181291
N