CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm004390
(
Prunus mume
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pm004390
T195952_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm004390
GATA
207
244
CKHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGTL
Links
Other
GATA
family TFs
Other
Prunus mume
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29842.m003687
Ricinus communis
29842.m003687
N
cassava7640.valid.m1
Manihot esculenta
cassava7640.valid.m1
N
POPTR_0001s30110
Populus trichocarpa
POPTR_0001s30110
N
POPTR_0009s09150
Populus trichocarpa
POPTR_0009s09150
N
SapurV1A.0005s0340
Salix purpurea
SapurV1A.0005s0340
N
SapurV1A.0692s0010
Salix purpurea
SapurV1A.0692s0010
N
SapurV1A.0692s0040
Salix purpurea
SapurV1A.0692s0040
N