Aquca_009_00534 (Aquilegia coerulea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Aquca_009_00534 T196368_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.848 0.833
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.848 0.833
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.848 0.833
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.834 0.833
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.834 0.833
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.833 0.778
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.833 0.778
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.833 0.778
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.833 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.832 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.778
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.819 0.750
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.819 0.750
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.819 0.750
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.819 0.750
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_009_00534.1 GATA 234 269

Links

Other GATA family TFs
Other Aquilegia coerulea TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010472 Aedes aegypti AAEL010472 I 0.000
AALB003178 Anopheles albimanus AALB003178 I 0.000
AARA011500 Anopheles arabiensis AARA011500 I 0.000
ACEP26870 Atta cephalotes ACEP26870 I 0.000
ACHR000367 Anopheles christyi ACHR000367 I 0.000
ACOM033000 Anopheles coluzzii ACOM033000 I 0.000
ACUA016345 Anopheles culicifacies ACUA016345 I 0.000
ADIR002616 Anopheles dirus ADIR002616 I 0.000
AEPI003935 Anopheles epiroticus AEPI003935 I 0.000
AFAF009626 Anopheles farauti AFAF009626 I 0.000
Afo_R010378 Aptenodytes forsteri Afo_R010378 I 0.000
AFUN001469 Anopheles funestus AFUN001469 I 0.000
AMAM004582 Anopheles maculatus AMAM004582 I 0.000
AMEC016032 Anopheles melas AMEC016032 I 0.000
AMEM008015 Anopheles merus AMEM008015 I 0.000
AMIN002999 Anopheles minimus AMIN002999 I 0.000
AQUA006236 Anopheles quadriannulatus AQUA006236 I 0.000
ASTEI11387 Anopheles stephensi ASTEI11387 I 0.000
BGIBMGA013959 Bombyx mori BGIBMGA013959 I 0.000
Cflo_01951--XP_001121011.1_APIME Camponotus floridanus Cflo_01951--XP_001121011.1_APIME I 0.000
CPIJ014602 Culex quinquefasciatus CPIJ014602 I 0.000
CpipJ_CPIJ014602 Culex pipiens CpipJ_CPIJ014602 I 0.000
GB40906 Apis mellifera GB40906 I 0.000
HHAL006178-PA Halyomorpha halys HHAL006178-PA N 0.000
Hsal_07700--XP_001121011.1_APIME Harpegnathos saltator Hsal_07700--XP_001121011.1_APIME I 0.000
KGM_01922 Danaus plexippus KGM_01922 I 0.000
L798_06639 Zootermopsis nevadensis L798_06639 I 0.000
LDEC012804 Leptinotarsa decemlineata LDEC012804 I 0.000
LLOJ006043 Lutzomyia longipalpis LLOJ006043 I 0.000
LYL1 Ochotona princeps ENSOPRG00000009458 I 0.000
MCINX015509 Melitaea cinxia MCINX015509 I 0.000
Myotis_brandtii_TMEM38B_10031594 Myotis brandtii Myotis_brandtii_TMEM38B_10031594 I 0.000
RPRC000013 Rhodnius prolixus RPRC000013 N 0.000
SINV21956 Solenopsis invicta SINV21956 I 0.000
TC009117 Tribolium castaneum TC009117 I 0.000