Aquca_034_00184 (Aquilegia coerulea)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Aquca_034_00184 T196379_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.857 0.861
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.857 0.861
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.853 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.853 0.889
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.851 0.861
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.851 0.861
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.851 0.861
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.847 0.833
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.837 0.861
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.832 0.833
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.832 0.833
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.832 0.833
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.750
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.750
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.819 0.750
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_034_00184.1 GATA 170 205

Links

Other GATA family TFs
Other Aquilegia coerulea TFs

609 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA010850 Oryza indica BGIOSGA010850 N 0.000
BRADI1G43900 Brachypodium distachyon BRADI1G43900 N 0.000
BRADI1G64060 Brachypodium distachyon BRADI1G64060 N 0.000
GRMZM2G056099 Zea mays GRMZM2G056099 N 0.000
GRMZM2G174284 Zea mays GRMZM2G174284 N 0.000
MLOC_64008 Hordeum vulgare MLOC_64008 N 0.000
OBART03G15290 Oryza barthii OBART03G15290 N 0.000
OGLUM03G15460 Oryza glumaepatula OGLUM03G15460 N 0.000
OLONG_001724 Oryza longistaminata OLONG_001724 N 0.000
OMERI03G13930 Oryza meridionalis OMERI03G13930 N 0.000
ONIVA03G16290 Oryza nivara ONIVA03G16290 N 0.000
OPUNC03G14770 Oryza punctata OPUNC03G14770 N 0.000
ORGLA03G0146300 Oryza glaberrima ORGLA03G0146300 N 0.000
Pavir.Da01921 Panicum virgatum Pavir.Da01921 N 0.000
Pavir.J20659 Panicum virgatum Pavir.J20659 N 0.000
Sb01g037050 Sorghum bicolor Sb01g037050 N 0.000
Si006667m.g Setaria italica Si006667m.g N 0.000
Si036527m.g Setaria italica Si036527m.g N 0.000
TGA2.2 Oryza sativa OS03G0318600 N 0.000
Traes_4AS_6EDD5ACF7 Triticum aestivum Traes_4AS_6EDD5ACF7 N 0.000
Traes_4BL_DAFEC95DD Triticum aestivum Traes_4BL_DAFEC95DD N 0.000
Traes_4DL_73DC40D7B Triticum aestivum Traes_4DL_73DC40D7B N 0.000