Gorai.005G247900 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.005G247900 T196593_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.857 0.857
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.857 0.857
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.853 0.914
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.853 0.914
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.847 0.829
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.829
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.829
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.829
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.839 0.914
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.837 0.829
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.800
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.832 0.800
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.832 0.800
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.832 0.800
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.800
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.743
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.743
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.743
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G247900.1 GATA 244 278
Gorai.005G247900.2 GATA 242 276

Links

Other GATA family TFs
Other Gossypium raimondii TFs

613 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH84751 Xenopus laevis AAH84751 I 0.000
Aan_R005833 Calypte anna Aan_R005833 I 0.000
Aan_R015716 Calypte anna Aan_R015716 I 0.000
Afo_R008896 Aptenodytes forsteri Afo_R008896 I 0.000
Afo_R010444 Aptenodytes forsteri Afo_R010444 I 0.000
Alligator_sinensis_CCG018614.2 Alligator sinensis Alligator_sinensis_CCG018614.2 I 0.000
Alligator_sinensis_CCG020726.1 Alligator sinensis Alligator_sinensis_CCG020726.1 I 0.000
Brh_R002176 Buceros rhinoceros Brh_R002176 I 0.000
Brh_R012802 Buceros rhinoceros Brh_R012802 I 0.000
Cmyd_10009585 Chelonia mydas Cmyd_10009585 I 0.000
Cmyd_10009780 Chelonia mydas Cmyd_10009780 I 0.000
ENSACAG00000010878 Anolis carolinensis ENSACAG00000010878 I 0.000
ENSAMEG00000001647 Ailuropoda melanoleuca ENSAMEG00000001647 I 0.000
ENSAMEG00000011405 Ailuropoda melanoleuca ENSAMEG00000011405 I 0.000
ENSAMXG00000001001 Astyanax mexicanus ENSAMXG00000001001 I 0.000
ENSAMXG00000001956 Astyanax mexicanus ENSAMXG00000001956 I 0.000
ENSAMXG00000015681 Astyanax mexicanus ENSAMXG00000015681 I 0.000
ENSAPLG00000002955 Anas platyrhynchos ENSAPLG00000002955 I 0.000
ENSAPLG00000010816 Anas platyrhynchos ENSAPLG00000010816 I 0.000
ENSCING00000003435 Ciona intestinalis ENSCING00000003435 D 0.000
ENSCPOG00000013402 Cavia porcellus ENSCPOG00000013402 I 0.000
ENSCSAG00000001017 Chlorocebus sabaeus ENSCSAG00000001017 I 0.000
ENSCSAG00000016428 Chlorocebus sabaeus ENSCSAG00000016428 I 0.000
ENSCSAVG00000000320 Ciona savignyi ENSCSAVG00000000320 I 0.000
ENSFALG00000001378 Ficedula albicollis ENSFALG00000001378 I 0.000
ENSFALG00000005856 Ficedula albicollis ENSFALG00000005856 I 0.000
ENSGALG00000000981 Gallus gallus ENSGALG00000000981 I 0.000
ENSGALG00000027470 Gallus gallus ENSGALG00000027470 I 0.000
ENSGMOG00000000899 Gadus morhua ENSGMOG00000000899 I 0.000
ENSGMOG00000013494 Gadus morhua ENSGMOG00000013494 I 0.000
ENSGMOG00000014002 Gadus morhua ENSGMOG00000014002 I 0.000
ENSLACG00000007355 Latimeria chalumnae ENSLACG00000007355 I 0.000
ENSLACG00000011757 Latimeria chalumnae ENSLACG00000011757 I 0.000
ENSLOCG00000001741 Lepisosteus oculatus ENSLOCG00000001741 I 0.000
ENSLOCG00000003512 Lepisosteus oculatus ENSLOCG00000003512 I 0.000
ENSMEUG00000004906 Macropus eugenii ENSMEUG00000004906 I 0.000
ENSMEUG00000008516 Macropus eugenii ENSMEUG00000008516 I 0.000
ENSMMUG00000006168 Macaca mulatta ENSMMUG00000006168 I 0.000
ENSMMUP00000008108 Macaca fascicularis ENSMMUP00000008108 I 0.000
ENSMODG00000010947 Monodelphis domestica ENSMODG00000010947 D 0.000
ENSMPUG00000008374 Mustela putorius furo ENSMPUG00000008374 I 0.000
ENSMPUG00000015503 Mustela putorius furo ENSMPUG00000015503 I 0.000
ENSNLEG00000009837 Nomascus leucogenys ENSNLEG00000009837 I 0.000
ENSNLEG00000010094 Nomascus leucogenys ENSNLEG00000010094 I 0.000
ENSOARG00000002809 Ovis aries ENSOARG00000002809 I 0.000
ENSOARG00000010596 Ovis aries ENSOARG00000010596 I 0.000
ENSONIG00000007575 Oreochromis niloticus ENSONIG00000007575 I 0.000
ENSONIG00000017972 Oreochromis niloticus ENSONIG00000017972 I 0.000
ENSORLG00000020761 Oryzias latipes ENSORLG00000020761 I 0.000
ENSP00000266068-D1 Bos grunniens ENSP00000266068-D1 I 0.000
ENSP00000294409-D1 Bos grunniens ENSP00000294409-D1 I 0.000
ENSP00000381890 Macaca fascicularis ENSP00000381890 I 0.000
ENSPANG00000018743 Papio anubis ENSPANG00000018743 I 0.000
ENSPANG00000024129 Papio anubis ENSPANG00000024129 I 0.000
ENSPFOG00000002327 Poecilia formosa ENSPFOG00000002327 I 0.000
ENSPFOG00000004759 Poecilia formosa ENSPFOG00000004759 I 0.000
ENSPFOG00000017553 Poecilia formosa ENSPFOG00000017553 I 0.000
ENSPPYG00000001635 Pongo abelii ENSPPYG00000001635 I 0.000
ENSPPYG00000011242 Pongo abelii ENSPPYG00000011242 I 0.000
ENSPSIG00000013495 Pelodiscus sinensis ENSPSIG00000013495 I 0.000
ENSPSIG00000016715 Pelodiscus sinensis ENSPSIG00000016715 I 0.000
ENSSHAG00000009099 Sarcophilus harrisii ENSSHAG00000009099 I 0.000
ENSSHAG00000018066 Sarcophilus harrisii ENSSHAG00000018066 I 0.000
ENSSTOG00000023031 Ictidomys tridecemlineatus ENSSTOG00000023031 I 0.000
ENSTNIG00000008152 Tetraodon nigroviridis ENSTNIG00000008152 I 0.000
ENSTNIG00000009672 Tetraodon nigroviridis ENSTNIG00000009672 I 0.000
ENSTRUG00000014439 Takifugu rubripes ENSTRUG00000014439 I 0.000
ENSTSYG00000002782 Tarsius syrichta ENSTSYG00000002782 I 0.000
ENSXMAG00000012852 Xiphophorus maculatus ENSXMAG00000012852 I 0.000
ENSXMAG00000012875 Xiphophorus maculatus ENSXMAG00000012875 I 0.000
Gfo_R005287 Geospiza fortis Gfo_R005287 I 0.000
Gfo_R008934 Geospiza fortis Gfo_R008934 I 0.000
GMEB1 Bos taurus ENSBTAG00000001160 I 0.000
GMEB1 Canis familiaris ENSCAFG00000011711 I 0.000
GMEB1 Callithrix jacchus ENSCJAG00000009754 I 0.000
gmeb1 Danio rerio ENSDARG00000062060 I 0.000
GMEB1 Dasypus novemcinctus ENSDNOG00000025258 I 0.000
GMEB1 Equus caballus ENSECAG00000009764 I 0.000
GMEB1 Echinops telfairi ENSETEG00000000775 I 0.000
GMEB1 Felis catus ENSFCAG00000018209 I 0.000
GMEB1 Homo sapiens ENSG00000162419 D 0.000
gmeb1 Gasterosteus aculeatus ENSGACG00000007791 I 0.000
GMEB1 Gorilla gorilla ENSGGOG00000009221 I 0.000
GMEB1 Loxodonta africana ENSLAFG00000011849 I 0.000
GMEB1 Meleagris gallopavo ENSMGAG00000001716 D 0.000
GMEB1 Myotis lucifugus ENSMLUG00000012602 I 0.000
GMEB1 Macaca mulatta ENSMMUG00000011390 I 0.000
Gmeb1 Mus musculus ENSMUSG00000028901 D 0.000
GMEB1 Ornithorhynchus anatinus ENSOANG00000006127 I 0.000
GMEB1 Oryctolagus cuniculus ENSOCUG00000010893 I 0.000
gmeb1 Oryzias latipes ENSORLG00000008294 I 0.000
GMEB1 Pan troglodytes ENSPTRG00000000438 I 0.000
GMEB1 Pteropus vampyrus ENSPVAG00000017223 D 0.000
Gmeb1 Rattus norvegicus ENSRNOG00000010910 I 0.000
GMEB1 Sorex araneus ENSSARG00000001145 I 0.000
GMEB1 Taeniopygia guttata ENSTGUG00000000731 I 0.000
gmeb1 Tetraodon nigroviridis ENSTNIG00000003832 I 0.000
GMEB1 Takifugu rubripes ENSTRUG00000011964 I 0.000
GMEB1 Tursiops truncatus ENSTTRG00000013602 I 0.000
GMEB1 Vicugna pacos ENSVPAG00000006781 I 0.000
gmeb1 Xenopus tropicalis XB-GENE-1002169 D 0.000
gmeb1.S Xenopus laevis XB-GENE-1002174 D 0.000
GMEB2 Anolis carolinensis ENSACAG00000011613 D 0.000
GMEB2 Canis familiaris ENSCAFG00000013008 I 0.000
GMEB2 Callithrix jacchus ENSCJAG00000010283 I 0.000
GMEB2 Cavia porcellus ENSCPOG00000025567 I 0.000
GMEB2 Danio rerio ENSDARG00000093240 I 0.000
GMEB2 Dasypus novemcinctus ENSDNOG00000041843 I 0.000
GMEB2 Equus caballus ENSECAG00000019377 I 0.000
GMEB2 Erinaceus europaeus ENSEEUG00000001478 I 0.000
GMEB2 Felis catus ENSFCAG00000031273 I 0.000
GMEB2 Homo sapiens ENSG00000101216 D 0.000
GMEB2 Gorilla gorilla ENSGGOG00000008653 I 0.000
GMEB2 Loxodonta africana ENSLAFG00000012335 I 0.000
GMEB2 Meleagris gallopavo ENSMGAG00000006922 D 0.000
GMEB2 Microcebus murinus ENSMICG00000010614 I 0.000
GMEB2 Myotis lucifugus ENSMLUG00000014606 I 0.000
GMEB2 Monodelphis domestica ENSMODG00000016974 I 0.000
Gmeb2 Mus musculus ENSMUSG00000038705 D 0.000
GMEB2 Ornithorhynchus anatinus ENSOANG00000004939 I 0.000
GMEB2 Oryctolagus cuniculus ENSOCUG00000025815 I 0.000
GMEB2 Otolemur garnettii ENSOGAG00000008826 I 0.000
GMEB2 Procavia capensis ENSPCAG00000000522 I 0.000
GMEB2 Pan troglodytes ENSPTRG00000013744 I 0.000
GMEB2 Pteropus vampyrus ENSPVAG00000013473 I 0.000
Gmeb2 Rattus norvegicus ENSRNOG00000013339 I 0.000
GMEB2 Taeniopygia guttata ENSTGUG00000006996 I 0.000
gmeb2 Xenopus tropicalis XB-GENE-5755487 I 0.000
gmeb2.S Xenopus laevis XB-GENE-5755500 I 0.000
Myotis_brandtii_GMEB1_10029602 Myotis brandtii Myotis_brandtii_GMEB1_10029602 I 0.000
Myotis_brandtii_GMEB2_10023457 Myotis brandtii Myotis_brandtii_GMEB2_10023457 I 0.000
Ogr01986 Ophisaurus gracilis Ogr01986 I 0.000
Ogr06841 Ophisaurus gracilis Ogr06841 I 0.000
Pvit_01323 Pogona vitticeps Pvit_01323 I 0.000
Pvit_15570 Pogona vitticeps Pvit_15570 I 0.000
si:ch73-302a13.2 Gasterosteus aculeatus ENSGACG00000003620 I 0.000
si:ch73-302a13.2 Tetraodon nigroviridis ENSTNIG00000002528 I 0.000
si:ch73-302a13.2 Takifugu rubripes ENSTRUG00000012194 I 0.000
Tal_R007596 Tyto alba Tal_R007596 I 0.000