Pavir.J00664 (Panicum virgatum)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Pavir.J00664 T196759_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00664.1.p GATA 171 208

Links

Other GATA family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29711.m000322 Ricinus communis 29711.m000322 I
29830.m001386 Ricinus communis 29830.m001386 I
AMTR_s00041p00193340 Amborella trichopoda AMTR_s00041p00193340 I
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I
BGIOSGA008112 Oryza indica BGIOSGA008112 I
bHLH11 Vitis vinifera VIT_04s0023g03430 I
bHLH121 Vitis vinifera VIT_03s0038g01790 I
bHLH121 Arabidopsis lyrata fgenesh2_kg.3__2204__AT3G19860.1 I
BHLH121 Arabidopsis thaliana AT3G19860 I
Bo1g112310 Brassica oleracea Bo1g112310 I
Bo7g117760 Brassica oleracea Bo7g117760 N
Bostr.19424s0675 Boechera stricta Bostr.19424s0675 I
Bra017745 Brassica rapa Bra017745 N
Bra038236 Brassica rapa Bra038236 I
BRADI3G11520 Brachypodium distachyon BRADI3G11520 I
Cagra.0316s0082 Capsella grandiflora Cagra.0316s0082 I
cassava24935.valid.m1 Manihot esculenta cassava24935.valid.m1 I
cassava24936.valid.m1 Manihot esculenta cassava24936.valid.m1 I
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I
Cla014511 Citrullus lanatus Cla014511 I
Cucsa.043580 Cucumis sativus Cucsa.043580 I
Cucsa.169240 Cucumis sativus Cucsa.169240 I
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I
Eucgr.I02346 Eucalyptus grandis Eucgr.I02346 I
evm.TU.supercontig_6.255 Carica papaya evm.TU.supercontig_6.255 I
gene07391-v1.0-hybrid Fragaria vesca gene07391-v1.0-hybrid I
gene14608-v1.0-hybrid Fragaria vesca gene14608-v1.0-hybrid I
GLYMA08G15740 Glycine max GLYMA08G15740 I
GLYMA12G02740 Glycine max GLYMA12G02740 I
GLYMA15G29630 Glycine max GLYMA15G29630 I
Gorai.005G252200 Gossypium raimondii Gorai.005G252200 I
GRMZM2G114444 Zea mays GRMZM2G114444 I
GSMUA_Achr11G16630_001 Musa acuminata GSMUA_Achr11G16630_001 I
LPERR02G12290 Leersia perrieri LPERR02G12290 I
Lus10028456.g Linum usitatissimum Lus10028456.g I
Lus10041908.g Linum usitatissimum Lus10041908.g I
MDP0000275844 Malus domestica MDP0000275844 I
mgf017107m Mimulus guttatus mgf017107m I
OB0197G10010 Oryza brachyantha OB0197G10010 I
OPUNC02G13570 Oryza punctata OPUNC02G13570 I
orange1.1g022288m.g Citrus sinensis orange1.1g022288m.g I
OS02G0433600 Oryza sativa OS02G0433600 I
Pavir.Aa02015 Panicum virgatum Pavir.Aa02015 I
Pavir.Ab01730 Panicum virgatum Pavir.Ab01730 I
PK18401.1 Cannabis sativa PK18401.1 D
Pm021043 Prunus mume Pm021043 I
Pm026758 Prunus mume Pm026758 I
POPTR_0004s17540 Populus trichocarpa POPTR_0004s17540 I
POPTR_0005s11550 Populus trichocarpa POPTR_0005s11550 I
PRUPE_ppa008347mg Prunus persica PRUPE_ppa008347mg I
PRUPE_ppa008596mg Prunus persica PRUPE_ppa008596mg I
SapurV1A.0117s0370 Salix purpurea SapurV1A.0117s0370 I
SapurV1A.1150s0140 Salix purpurea SapurV1A.1150s0140 I
Sb03g028030 Sorghum bicolor Sb03g028030 I
TCM_000204 Theobroma cacao TCM_000204 I
TCM_006692 Theobroma cacao TCM_006692 I
Thhalv10021271m.g Eutrema salsugineum Thhalv10021271m.g I
Thhalv10023630m.g Eutrema salsugineum Thhalv10023630m.g I
Thhalv10026039m.g Eutrema salsugineum Thhalv10026039m.g N