DILT_0000717101 (Diphyllobothrium latum)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 DILT_0000717101 T198240_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.627 0.627
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.627 0.627
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.627 0.627
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.627 0.627
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DILT_0000717101-mRNA-1 GCM 206 289

Links

Other GCM family TFs
Other Diphyllobothrium latum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIBMGA000497 Bombyx mori BGIBMGA000497 N
CapteG155726 Capitella teleta CapteG155726 N
CapteG94620 Capitella teleta CapteG94620 N
Cflo_08746--XP_001120922.1_APIME Camponotus floridanus Cflo_08746--XP_001120922.1_APIME N
CGI_10004257 Crassostrea gigas CGI_10004257 N
csin110359 Clonorchis sinensis csin110359 N
D915_09507 Fasciola hepatica D915_09507 N
DAPPUDRAFT_39727 Daphnia pulex DAPPUDRAFT_39727 N
ECPE_0000630101 Echinostoma caproni ECPE_0000630101 N
ENSAMXG00000018323 Astyanax mexicanus ENSAMXG00000018323 N
ENSLACG00000012364 Latimeria chalumnae ENSLACG00000012364 N
ENSLOCG00000009094 Lepisosteus oculatus ENSLOCG00000009094 N
ENSMODG00000023118 Monodelphis domestica ENSMODG00000023118 N
ENSOANG00000012949 Ornithorhynchus anatinus ENSOANG00000012949 N
ENSORLG00000018098 Oryzias latipes ENSORLG00000018098 N
ENSPFOG00000002143 Poecilia formosa ENSPFOG00000002143 N
ENSPMAG00000000069 Petromyzon marinus ENSPMAG00000000069 N
GB40407 Apis mellifera GB40407 N
HelroG64733 Helobdella robusta HelroG64733 N
Hsal_12996--XP_001120922.1_APIME Harpegnathos saltator Hsal_12996--XP_001120922.1_APIME N
LotgiG79113 Lottia gigantea LotgiG79113 N
NV10328 Nasonia vitripennis NV10328 N
Ocbimv22015923m.g Octopus bimaculoides Ocbimv22015923m.g N
PHUM498340 Pediculus humanus PHUM498340 N
Sakowv30007281m.g Saccoglossus kowalevskii Sakowv30007281m.g N
si:dkey-34f9.3 Danio rerio ENSDARG00000077813 N
tetur28g00880 Tetranychus urticae tetur28g00880 N
XP_002932070 Xenopus tropicalis XP_002932070 N