SPER_0003881901 (Spirometra erinaceieuropaei)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 SPER_0003881901 T198268_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.642 0.642
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.642 0.642
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.642 0.642
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.642 0.642
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.617 0.617
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.617 0.617
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.617 0.617
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPER_0003881901-mRNA-1 GCM 166 247

Links

Other GCM family TFs
Other Spirometra erinaceieuropaei TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH73068 Xenopus laevis AAH73068 I
Aan_R006576 Calypte anna Aan_R006576 I
Afo_R002092 Aptenodytes forsteri Afo_R002092 I
Afo_R014591 Aptenodytes forsteri Afo_R014591 I
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I
Alligator_sinensis_CCG020455.1 Alligator sinensis Alligator_sinensis_CCG020455.1 I
Brh_R005520 Buceros rhinoceros Brh_R005520 I
Cmyd_10011173 Chelonia mydas Cmyd_10011173 I
ENSAMEG00000000752 Ailuropoda melanoleuca ENSAMEG00000000752 I
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I
ENSAMXG00000008869 Astyanax mexicanus ENSAMXG00000008869 I
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I
ENSAPLG00000005226 Anas platyrhynchos ENSAPLG00000005226 I
ENSBTAP00000008112-D1 Bos grunniens ENSBTAP00000008112-D1 I
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I
ENSCSAG00000009955 Chlorocebus sabaeus ENSCSAG00000009955 I
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I
ENSLOCG00000003619 Lepisosteus oculatus ENSLOCG00000003619 I
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I
ENSMPUG00000003522 Mustela putorius furo ENSMPUG00000003522 I
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I
ENSOPRG00000009136 Ochotona princeps ENSOPRG00000009136 I
ENSP00000363064 Macaca fascicularis ENSP00000363064 I
ENSP00000379847 Macaca fascicularis ENSP00000379847 I
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I
ENSPANG00000021154 Papio anubis ENSPANG00000021154 I
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I
ENSPPYG00000003495 Pongo abelii ENSPPYG00000003495 I
ENSPPYG00000016525 Pongo abelii ENSPPYG00000016525 I
ENSPSIG00000005652 Pelodiscus sinensis ENSPSIG00000005652 I
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I
ENSSHAG00000009934 Sarcophilus harrisii ENSSHAG00000009934 I
ENSSTOG00000000256 Ictidomys tridecemlineatus ENSSTOG00000000256 I
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I
estExt_fgenesh2_pg.C_1970081 Branchiostoma floridae estExt_fgenesh2_pg.C_1970081 I
Gfo_R002960 Geospiza fortis Gfo_R002960 I
Gfo_R011843 Geospiza fortis Gfo_R011843 I
LotgiG222832 Lottia gigantea LotgiG222832 I
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I
Myotis_brandtii_ZNF76_10017771 Myotis brandtii Myotis_brandtii_ZNF76_10017771 I
Ocbimv22038914m.g Octopus bimaculoides Ocbimv22038914m.g I
Ogr18895 Ophisaurus gracilis Ogr18895 I
Pvit_03784 Pogona vitticeps Pvit_03784 I
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I
SMAR015659 Strigamia maritima SMAR015659 I
Tal_R001092 Tyto alba Tal_R001092 I
Tal_R002540 Tyto alba Tal_R002540 I
Zfp143 Mus musculus ENSMUSG00000061079 D
Zfp143 Rattus norvegicus ENSRNOG00000010087 I
Zfp523 Mus musculus ENSMUSG00000024220 I
Zfp523 Rattus norvegicus ENSRNOG00000000501 I
ZNF143 Anolis carolinensis ENSACAG00000009338 I
ZNF143 Canis familiaris ENSCAFG00000007373 I
ZNF143 Callithrix jacchus ENSCJAG00000011327 I
ZNF143 Cavia porcellus ENSCPOG00000003109 I
ZNF143 Equus caballus ENSECAG00000018889 I
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I
ZNF143 Felis catus ENSFCAG00000002342 I
ZNF143 Homo sapiens ENSG00000166478 D
ZNF143 Gallus gallus ENSGALG00000005787 I
ZNF143 Loxodonta africana ENSLAFG00000004487 I
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I
ZNF143 Microcebus murinus ENSMICG00000004353 I
ZNF143 Myotis lucifugus ENSMLUG00000000213 I
ZNF143 Macaca mulatta ENSMMUG00000008758 I
ZNF143 Monodelphis domestica ENSMODG00000007909 I
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I
ZNF143 Otolemur garnettii ENSOGAG00000011518 I
ZNF143 Ochotona princeps ENSOPRG00000005466 I
ZNF143 Pan troglodytes ENSPTRG00000003349 I
ZNF143 Sorex araneus ENSSARG00000007780 I
znf143 Takifugu rubripes ENSTRUG00000009324 I
ZNF143 Tursiops truncatus ENSTTRG00000015353 I
znf143 Xenopus tropicalis XB-GENE-1012504 I
znf143.S Xenopus laevis XB-GENE-1012509 I
znf143b Danio rerio ENSDARG00000041581 I
znf143b Gasterosteus aculeatus ENSGACG00000009776 I
znf143b Oryzias latipes ENSORLG00000001130 I
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I
ZNF76 Bos taurus ENSBTAG00000006170 I
ZNF76 Canis familiaris ENSCAFG00000001304 I
ZNF76 Choloepus hoffmanni ENSCHOG00000003197 I
ZNF76 Callithrix jacchus ENSCJAG00000015519 I
ZNF76 Cavia porcellus ENSCPOG00000007381 I
znf76 Danio rerio ENSDARG00000013279 I
ZNF76 Dasypus novemcinctus ENSDNOG00000015856 I
ZNF76 Equus caballus ENSECAG00000014843 I
ZNF76 Felis catus ENSFCAG00000005893 I
ZNF76 Homo sapiens ENSG00000065029 D
ZNF76 Gorilla gorilla ENSGGOG00000014188 I
ZNF76 Loxodonta africana ENSLAFG00000026071 I
ZNF76 Myotis lucifugus ENSMLUG00000008610 I
ZNF76 Macaca mulatta ENSMMUG00000023559 I
ZNF76 Monodelphis domestica ENSMODG00000013806 I
ZNF76 Oryctolagus cuniculus ENSOCUG00000015630 I
ZNF76 Otolemur garnettii ENSOGAG00000002935 I
ZNF76 Pan troglodytes ENSPTRG00000018080 I
ZNF76 Pteropus vampyrus ENSPVAG00000008041 I
ZNF76 Sus scrofa ENSSSCG00000001537 I
ZNF76 Taeniopygia guttata ENSTGUG00000001745 I
ZNF76 Tursiops truncatus ENSTTRG00000009380 I