Ubp1 (Mus musculus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSMUSG00000009741 T199107_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.957 0.957
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.957 0.957
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.957 0.957
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.957 0.957
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.789 0.789
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.770 0.770
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.770 0.770
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.770 0.770
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.742 0.742
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.742 0.742
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.742 0.742
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.706 0.706
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.706 0.706
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.706 0.706
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.706 0.706
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.706 0.706
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.706 0.706
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.706 0.706
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.706 0.706
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.706 0.706
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000009885 Grainyhead 42 257
ENSMUSP00000081946 Grainyhead 42 257
ENSMUSP00000112192 Grainyhead 42 257

Links

Other Grainyhead family TFs
Other Mus musculus TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_04267 Colletotrichum fioriniae CFIO01_04267 N
Cob_11684 Colletotrichum orbiculare Cob_11684 N
MGG_04387 Magnaporthe oryzae MGG_04387 N
S40288_03578 Stachybotrys chartarum S40288_03578 N
VDAG_06923 Verticillium dahliae VDAG_06923 N
VDBG_05272 Verticillium albo atrum VDBG_05272 N
VDBG_05272 Verticillium alfalfae VDBG_05272 N