CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS05G0378500
(
Oryza sativa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OS05G0378500
T201072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS05T0378500-00
GRAS
154
558
LHGHLRRCAEALAASRPADADAELASIARMASSDGDAVQRVAAAFAEAMARVVIRPWRGVSAALFPSDAGAAGDALTAWEAEFARQSFLNLCPLLHLAAVAVNEIILETTRNDKFIHIVDLGGIHHAHWVELLQGLATRRAAVRPCLRLTIVHEHKHFLGQAAQVLAAESDRHGVPLDLHIVESSVEALKLDALGVRSDHAVVIVSTLQLHRLVGAGILSTTAPPSPAAAAAASMITSPLPPANMSSKVDRLLRGFHLLSPRAIILTENEANHFVPSFTDRFASALPYYEQLFAAMEEAGAATVERKAAERYLLREEIKDVIACDHDGPRWARHETLGRWVVRMGAAGFALAPAITVVTAAGRVRAVAARLPGGGDERRYGVTEGGGWLILNREEKPMFCVSAWR
Links
Other
GRAS
family TFs
Other
Oryza sativa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA023211
Oryza indica
BGIOSGA023211
N
Bo9g171420
Brassica oleracea
Bo9g171420
N
Bostr.23997s0022
Boechera stricta
Bostr.23997s0022
N
Bra008975
Brassica rapa
Bra008975
N
BRADI1G36770
Brachypodium distachyon
BRADI1G36770
N
BRADI1G58817
Brachypodium distachyon
BRADI1G58817
N
Cagra.7526s0026
Capsella grandiflora
Cagra.7526s0026
N
Carubv10002492m.g
Capsella rubella
Carubv10002492m.g
N
Cla021272
Citrullus lanatus
Cla021272
N
Cucsa.310460
Cucumis sativus
Cucsa.310460
N
evm.TU.supercontig_115.10
Carica papaya
evm.TU.supercontig_115.10
N
gene11668-v1.0-hybrid
Fragaria vesca
gene11668-v1.0-hybrid
N
Gorai.004G274200
Gossypium raimondii
Gorai.004G274200
N
GRMZM2G163641
Zea mays
GRMZM2G163641
N
LPERR06G16850
Leersia perrieri
LPERR06G16850
N
MDP0000119866
Malus domestica
MDP0000119866
N
MDP0000202143
Malus domestica
MDP0000202143
N
MLOC_45474
Hordeum vulgare
MLOC_45474
N
OB06G27850
Oryza brachyantha
OB06G27850
N
OBART06G20210
Oryza barthii
OBART06G20210
N
OCP3
Arabidopsis lyrata
fgenesh2_kg.6__1093__AT5G11270.1
N
OCP3
Arabidopsis thaliana
AT5G11270
N
OCP3
Vitis vinifera
VIT_04s0008g05190
N
OGLUM06G21270
Oryza glumaepatula
OGLUM06G21270
N
OLONG_013537
Oryza longistaminata
OLONG_013537
N
OMERI06G20820
Oryza meridionalis
OMERI06G20820
N
ONIVA06G23990
Oryza nivara
ONIVA06G23990
N
OPUNC06G18430
Oryza punctata
OPUNC06G18430
N
ORUFI06G21620
Oryza rufipogon
ORUFI06G21620
N
OS06G0601000
Oryza sativa
OS06G0601000
N
Pavir.Da00552
Panicum virgatum
Pavir.Da00552
N
Pavir.Db01233
Panicum virgatum
Pavir.Db01233
N
PGSC0003DMG400020785
Solanum tuberosum
PGSC0003DMG400020785
N
PK00680.1
Cannabis sativa
PK00680.1
N
Pm004594
Prunus mume
Pm004594
N
PRUPE_ppa007560mg
Prunus persica
PRUPE_ppa007560mg
N
Sb10g023400
Sorghum bicolor
Sb10g023400
N
Si006856m.g
Setaria italica
Si006856m.g
N
Solyc08g061140.2
Solanum lycopersicum
Solyc08g061140.2
N
TCM_038389
Theobroma cacao
TCM_038389
N
Thhalv10013990m.g
Eutrema salsugineum
Thhalv10013990m.g
N
Traes_7AL_0FFE02C4C
Triticum aestivum
Traes_7AL_0FFE02C4C
N
Traes_7DL_613F5240E
Triticum aestivum
Traes_7DL_613F5240E
N