CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s09790
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0005s09790
T201190_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s09790.1
GRAS
157
528
LVHLLLACAEALSCRDTRLAETMLSQIWPSVSPWGDSLQRVSFCFAMGLKCRLSHLNNVNAHGTFTIGGAMDRSLIVRAEKMEAFQLLHQATPYIAFGFMAANEAICQAAQEKDSLHIIDLGMEHALQWPSLMRILASRPEGPPKLRITGLIDGHNLLELEASMKELAEEASSLGIRLEFNLVSEPVSPLLLTTENLNLREGEALFVNSIMHLHKFVKESRGSLKAILQAIKKLNPTLLTVVEQDANHNGPFFLGRFIESLHYYSAIFDSLEASLPRNSPQRIKMEKVQFSTEICNIIAYEGSNRIERHERADQWRRQLSRAGFQVMGLKCMSQARMMLSVYGIDGYTLATEKGCLLLGWKGRPIMLASAWQ
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05399
Capronia coronata
A1O1_05399
N
A1O3_09248
Capronia epimyces
A1O3_09248
N
A1O5_02239
Cladophialophora psammophila
A1O5_02239
N
A1O7_07175
Cladophialophora yegresii
A1O7_07175
N
G647_02931
Cladophialophora carrionii
G647_02931
N
HMPREF1120_07588
Exophiala dermatitidis
HMPREF1120_07588
N
HMPREF1541_07883
Cyphellophora europaea
HMPREF1541_07883
N
PV04_07596
Capronia semiimmersa
PV04_07596
N
PV05_05090
Exophiala xenobiotica
PV05_05090
N
PV07_11175
Cladophialophora immunda
PV07_11175
N
PV08_00236
Exophiala spinifera
PV08_00236
N
PV10_06283
Exophiala mesophila
PV10_06283
N
PV11_00728
Exophiala sideris
PV11_00728
N
Z517_02574
Fonsecaea pedrosoi
Z517_02574
N
Z518_09345
Rhinocladiella mackenziei
Z518_09345
N
Z519_11740
Cladophialophora bantiana
Z519_11740
N