CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa005243mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa005243mg
T201283_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ12602
GRAS
46
468
LIHLLLTCANHVATGSLENANVALEQISQLASADGDTMQRIAAYFTEALADRILKAWPGLHRALNSTKISLVSEEFLVRKVFFEMLPFLKVAFVLANQAITEAMEGEKMVHVIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEVLDQMAHRLTEEAEKLDIPFQFCPIVSKLENLDMEKLRIKTGEALAISSVLQLHSLLASDDELLKKKSPLASKSSSGIPLPRVLQMNQGTLGELLEKEMGNGYGASPDSTSSSPLSLTASMKLDSFLNAFWSLTPKVMVIAEQDSNHNGSTLMERLLEALYSYAALFDCLESTMSRNSIERLKVEKMLFGEEIKNIIACEGCERKERHEKLEKWIQRLDLAGFGNVPLSYYGMLQAKRLLQGYGCDGYRMREENGCVLISWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30024.m001746
Ricinus communis
30024.m001746
N
0.830
30131.m007244
Ricinus communis
30131.m007244
N
0.777
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
0.757
Bo3g179450
Brassica oleracea
Bo3g179450
N
0.747
Bo5g078760
Brassica oleracea
Bo5g078760
N
0.746
Bo6g022200
Brassica oleracea
Bo6g022200
N
0.726
Bostr.26675s0133
Boechera stricta
Bostr.26675s0133
N
0.751
Bra014251
Brassica rapa
Bra014251
N
0.753
Bra018848
Brassica rapa
Bra018848
N
0.741
Cagra.0860s0005
Capsella grandiflora
Cagra.0860s0005
N
0.757
Carubv10008999m.g
Capsella rubella
Carubv10008999m.g
N
0.755
cassava1375.valid.m1
Manihot esculenta
cassava1375.valid.m1
N
0.788
cassava1376.valid.m1
Manihot esculenta
cassava1376.valid.m1
N
0.788
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
0.817
cassava20989.m1
Manihot esculenta
cassava20989.m1
N
0.747
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
0.831
Ca_11133
Cicer arietinum
Ca_11133
N
0.807
Ca_27441
Cicer arietinum
Ca_27441
N
0.823
chr1.CM0794.360.nd
Lotus japonicus
chr1.CM0794.360.nd
N
0.802
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
0.815
chr3.CM0460.90.nd
Lotus japonicus
chr3.CM0460.90.nd
N
0.815
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.832
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
0.768
Cla006433
Citrullus lanatus
Cla006433
N
0.807
Cla020893
Citrullus lanatus
Cla020893
N
0.722
Cucsa.055340
Cucumis sativus
Cucsa.055340
N
0.787
Cucsa.308180
Cucumis sativus
Cucsa.308180
N
0.736
Eucgr.B03716
Eucalyptus grandis
Eucgr.B03716
N
0.787
Eucgr.G03258
Eucalyptus grandis
Eucgr.G03258
N
0.744
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
0.768
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.834
gene14438-v1.0-hybrid
Fragaria vesca
gene14438-v1.0-hybrid
N
0.717
GLYMA01G43620
Glycine max
GLYMA01G43620
N
0.752
GLYMA11G01850
Glycine max
GLYMA11G01850
N
0.742
GLYMA11G10170
Glycine max
GLYMA11G10170
N
0.796
GLYMA12G02490
Glycine max
GLYMA12G02490
N
0.785
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.844
Gorai.012G080500
Gossypium raimondii
Gorai.012G080500
N
0.768
Gorai.013G015100
Gossypium raimondii
Gorai.013G015100
N
0.747
Gorai.013G252600
Gossypium raimondii
Gorai.013G252600
N
0.788
Lus10009717.g
Linum usitatissimum
Lus10009717.g
N
0.782
Lus10022418.g
Linum usitatissimum
Lus10022418.g
N
0.764
mgf008315m
Mimulus guttatus
mgf008315m
N
0.722
mgf022906m
Mimulus guttatus
mgf022906m
N
0.736
MTR_4g076140
Medicago truncatula
MTR_4g076140
N
0.778
MTR_5g009080
Medicago truncatula
MTR_5g009080
N
0.815
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
0.776
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.835
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.786
PGSC0003DMG400022709
Solanum tuberosum
PGSC0003DMG400022709
N
0.752
PK02707.1
Cannabis sativa
PK02707.1
N
0.741
Pm012190
Prunus mume
Pm012190
N
0.997
Pm016466
Prunus mume
Pm016466
N
0.733
Pm029840
Prunus mume
Pm029840
N
0.733
POPTR_0001s06090
Populus trichocarpa
POPTR_0001s06090
N
0.760
POPTR_0003s20100
Populus trichocarpa
POPTR_0003s20100
N
0.771
PRUPE_ppa005439mg
Prunus persica
PRUPE_ppa005439mg
N
0.733
SapurV1A.0009s0760
Salix purpurea
SapurV1A.0009s0760
N
0.771
SapurV1A.0415s0050
Salix purpurea
SapurV1A.0415s0050
N
0.805
SapurV1A.0504s0280
Salix purpurea
SapurV1A.0504s0280
N
0.755
SCL3
Populus trichocarpa
POPTR_0009s05330
N
0.816
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.831
SCL3
Arabidopsis lyrata
fgenesh2_kg.1__4122__AT1G50420.1
N
0.749
SCL3
Arabidopsis thaliana
AT1G50420
N
0.757
Solyc01g008910.2
Solanum lycopersicum
Solyc01g008910.2
N
0.749
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.784
TCM_040833
Theobroma cacao
TCM_040833
N
0.864
TCM_042392
Theobroma cacao
TCM_042392
N
0.766
Thhalv10011447m.g
Eutrema salsugineum
Thhalv10011447m.g
N
0.749
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.768