CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si029296m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si029296m.g
T201523_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si029296m
GRAS
187
593
ASQLLLECARAVAARDSQRVQQLMWMLNELASPYGEVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASPEPQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGASTALAVNCVNSLRGVVPGGARRRDAFTSSLRRLDPRVVTVVEEEADLVASDPDTSSEEGGDSEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWK
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G23060
Brachypodium distachyon
BRADI1G23060
N
0.899
GRMZM2G019060
Zea mays
GRMZM2G019060
N
0.954
GRMZM2G132794
Zea mays
GRMZM2G132794
N
0.873
GRMZM2G172657
Zea mays
GRMZM2G172657
N
0.967
GSMUA_Achr1G22470_001
Musa acuminata
GSMUA_Achr1G22470_001
N
0.775
GSMUA_Achr4G16460_001
Musa acuminata
GSMUA_Achr4G16460_001
N
0.767
GSMUA_Achr8G30950_001
Musa acuminata
GSMUA_Achr8G30950_001
N
0.799
LPERR07G17740
Leersia perrieri
LPERR07G17740
N
0.962
MLOC_62665
Hordeum vulgare
MLOC_62665
N
0.932
OB03G31410
Oryza brachyantha
OB03G31410
N
0.880
OB07G26110
Oryza brachyantha
OB07G26110
N
0.835
OBART07G20430
Oryza barthii
OBART07G20430
N
0.889
OGLUM03G23190
Oryza glumaepatula
OGLUM03G23190
N
0.873
OGLUM07G20210
Oryza glumaepatula
OGLUM07G20210
N
0.965
OMERI03G20220
Oryza meridionalis
OMERI03G20220
N
0.882
OMERI07G17100
Oryza meridionalis
OMERI07G17100
N
0.962
ONIVA03G24000
Oryza nivara
ONIVA03G24000
N
0.873
ONIVA07G18840
Oryza nivara
ONIVA07G18840
N
0.962
OPUNC03G21050
Oryza punctata
OPUNC03G21050
N
0.870
OPUNC07G19280
Oryza punctata
OPUNC07G19280
N
0.962
ORGLA03G0208800
Oryza glaberrima
ORGLA03G0208800
N
0.873
ORGLA07G0156800
Oryza glaberrima
ORGLA07G0156800
N
0.962
ORUFI03G23130
Oryza rufipogon
ORUFI03G23130
N
0.873
ORUFI07G21310
Oryza rufipogon
ORUFI07G21310
N
0.965
Pavir.Ba01071
Panicum virgatum
Pavir.Ba01071
N
0.984
Pavir.Bb01182
Panicum virgatum
Pavir.Bb01182
N
0.973
Pavir.Ia02979
Panicum virgatum
Pavir.Ia02979
N
0.873
Pavir.Ib01878
Panicum virgatum
Pavir.Ib01878
N
0.797
Sb02g037890
Sorghum bicolor
Sb02g037890
N
0.978
SHR1
Oryza sativa
OS07G0586900
N
0.965
SHR1
Oryza indica
BGIOSGA026037
N
0.962
SHR2
Oryza sativa
OS03G0433200
N
0.870
SHR2
Oryza indica
BGIOSGA010480
N
0.873
Si034653m.g
Setaria italica
Si034653m.g
N
0.875
Traes_2BS_736EF207B1
Triticum aestivum
Traes_2BS_736EF207B1
N
0.938