CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_13s0019g01220
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_13s0019g01220
T201838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_13s0019g01220.t01
GRAS
49
473
LIRLLVACANHVAAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKGWPGLHKALNSTKISSISEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFESAQWINLLQSLSARPEGPPHLRITGIHEQKEVLDLMALQLTKEAEKLDIPFQFNPIVSKLENLDFESLRVKTGEALAISSVLQLHTLLAIDDEMVGKSPSASKNTSAVHLQRVLQMNQRTLGEWLEKDLPNVYIPSPESASASTTSPLSLASSPKMGSFLAALWGLSPKLMVVTEQESNNNCPTLMERVMEALNFYAALFDCLESTLSRASIERQKVEKMLFGEEIKNIIACEGPERKERHEKLEKWVMRLELAGFGRVPLSYQGMLQASRLLVSYGYDGYRMKEENGCLVICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30131.m007263
Ricinus communis
30131.m007263
I
AMTR_s00106p00065610
Amborella trichopoda
AMTR_s00106p00065610
N
Aquca_035_00057
Aquilegia coerulea
Aquca_035_00057
I
Aquca_072_00078
Aquilegia coerulea
Aquca_072_00078
N
cassava18614.valid.m1
Manihot esculenta
cassava18614.valid.m1
I
Ca_05454
Cicer arietinum
Ca_05454
I
Ciclev10016071m.g
Citrus clementina
Ciclev10016071m.g
I
Ciclev10032259m.g
Citrus clementina
Ciclev10032259m.g
I
Cla009230
Citrullus lanatus
Cla009230
I
Cucsa.013870
Cucumis sativus
Cucsa.013870
I
Cucsa.280970
Cucumis sativus
Cucsa.280970
I
Eucgr.G02591
Eucalyptus grandis
Eucgr.G02591
I
evm.TU.supercontig_138.5
Carica papaya
evm.TU.supercontig_138.5
I
GLYMA07G28310
Glycine max
GLYMA07G28310
I
GLYMA08G40020
Glycine max
GLYMA08G40020
I
GLYMA10G42450
Glycine max
GLYMA10G42450
I
GLYMA18G18140
Glycine max
GLYMA18G18140
I
GLYMA20G01450
Glycine max
GLYMA20G01450
I
GLYMA20G24600
Glycine max
GLYMA20G24600
I
Gorai.005G212900
Gossypium raimondii
Gorai.005G212900
I
Gorai.008G147400
Gossypium raimondii
Gorai.008G147400
I
Gorai.012G135600
Gossypium raimondii
Gorai.012G135600
I
Gorai.013G067600
Gossypium raimondii
Gorai.013G067600
I
GSMUA_Achr1G17730_001
Musa acuminata
GSMUA_Achr1G17730_001
I
GSMUA_Achr9G20620_001
Musa acuminata
GSMUA_Achr9G20620_001
I
GSMUA_Achr9G23760_001
Musa acuminata
GSMUA_Achr9G23760_001
I
gw1.13.182.1
Physcomitrella patens
gw1.13.182.1
N
Lus10013447.g
Linum usitatissimum
Lus10013447.g
I
mgf009460m
Mimulus guttatus
mgf009460m
I
MTR_1g111830
Medicago truncatula
MTR_1g111830
I
orange1.1g022439m.g
Citrus sinensis
orange1.1g022439m.g
I
Pavir.Ga00233
Panicum virgatum
Pavir.Ga00233
N
Pavir.Gb00055
Panicum virgatum
Pavir.Gb00055
N
PGSC0003DMG400025303
Solanum tuberosum
PGSC0003DMG400025303
I
PK13672.1
Cannabis sativa
PK13672.1
I
POPTR_0010s24710
Populus trichocarpa
POPTR_0010s24710
I
PRUPE_ppa009396mg
Prunus persica
PRUPE_ppa009396mg
I
SapurV1A.0036s0350
Salix purpurea
SapurV1A.0036s0350
I
SapurV1A.0234s0050
Salix purpurea
SapurV1A.0234s0050
I
SapurV1A.0450s0110
Salix purpurea
SapurV1A.0450s0110
I
SapurV1A.1671s0040
Salix purpurea
SapurV1A.1671s0040
I
Si022762m.g
Setaria italica
Si022762m.g
N
Solyc04g008870.2
Solanum lycopersicum
Solyc04g008870.2
N
TCM_007672
Theobroma cacao
TCM_007672
I
TCM_041160
Theobroma cacao
TCM_041160
I
TCM_041362
Theobroma cacao
TCM_041362
N
VIT_10s0071g00660
Vitis vinifera
VIT_10s0071g00660
I