CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.308180
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.308180
T202143_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.308180.1
GRAS
48
463
LIHLLLGCANQVAIGNIENANVGLEQISHLASPDGDTMQRIAAYFTEALADRILKSWPGLHRALNSTKILSVPEEILAQRLFFELCPFLKLAYVMTNQAIIEAMEGERMIHIIDFKSCEPAQWINLLQTLKDRPDGPPHLRITGIHEQKEVLEQMALRLTEEAEKWDIPFQFTPVVSKLENLDLESLRVKTGEALAVSSVLELHSVLATDDDKKTSPPASKNLQKLLRMKQRTLGEWLETDSLQVFSSPDSASVSSPSGLNPSQKMNSFLTALWGLSPKVMVITEQESNLNGSAFMERVLEALNFYAALFDCLESTVSRSSIERQRVEKMLLGEEIKNIIACEGAERTERHEKLEKWMLRLESVGFGKVPLSYHSMLLGSRLLQSYGYDGYKIKEENGFLFICWQDRPLFSVSAWG
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
16480_YMR213W
Saccharomyces paradoxus
16480_YMR213W
N
17212_YMR213W
Saccharomyces mikatae
17212_YMR213W
N
19101_YMR213W
Saccharomyces bayanus
19101_YMR213W
N
CEF1
Saccharomyces cerevisiae
YMR213W
N
KAFR_0B03230
Kazachstania africana
KAFR_0B03230
N
KLTH0D12452g
Kluyveromyces thermotolerans
KLTH0D12452g
N
Kwal_9014
Kluyveromyces waltii
Kwal_9014
N
LALA0_S01e04984g
Lachancea lanzarotensis
LALA0_S01e04984g
N
NCAS_0C01050
Naumovozyma castellii
NCAS_0C01050
N
NDAI_0K01050
Naumovozyma dairenensis
NDAI_0K01050
N
SAKL0H05302g
Lachancea kluyveri
SAKL0H05302g
N
TDEL_0B03810
Torulaspora delbrueckii
TDEL_0B03810
N
TPHA_0G01400
Tetrapisispora phaffii
TPHA_0G01400
N
ZBAI_00661
Zygosaccharomyces bailii
ZBAI_00661
N
ZBAI_05956
Zygosaccharomyces bailii
ZBAI_05956
N
ZYRO0F09526g
Zygosaccharomyces rouxii
ZYRO0F09526g
N