CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.G03258
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.G03258
T202467_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.G03258.1
GRAS
49
464
LIRYLIGCANHVAAGSVDNANICLEQISHHASPDGDTMQRIAAYFTEALADRILKGWPGLHKALNSTKISPVSEEILVKRWFFELCPFLKLAYVITNQAILEAMDGEKMVHIIDLNSFEPAQWVNLLQSLRARPEGPPHLRITGIHEQKEVLDQMALRLNEEAEKLDIPFQFNPVVCKLENLDLESLRVKTGEALAISSVLQLHTILAADDEMQRRTSPSASNSSNSSHQQRALHMKQRTLGEWLEKDVVNLYCASPDSALVSSPKMGGFLTSLWGLSPKLMVITEQESNHNGTLMERYVEALYFYGSLFDCLESTVPRASVERQKVEKMLFGEEIKNIIACEGIQRKERHEKLEKWILRLELAGFGKVSLSYNGLLQAGRLLQNYGYDGYTLKEENGCLLLCWHDRPLFSVSAWR
Eucgr.G03258.2
GRAS
49
464
LIRYLIGCANHVAAGSVDNANICLEQISHHASPDGDTMQRIAAYFTEALADRILKGWPGLHKALNSTKISPVSEEILVKRWFFELCPFLKLAYVITNQAILEAMDGEKMVHIIDLNSFEPAQWVNLLQSLRARPEGPPHLRITGIHEQKEVLDQMALRLNEEAEKLDIPFQFNPVVCKLENLDLESLRVKTGEALAISSVLQLHTILAADDEMQRRTSPSASNSSNSSHQQRALHMKQRTLGEWLEKDVVNLYCASPDSALVSSPKMGGFLTSLWGLSPKLMVITEQESNHNGTLMERYVEALYFYGSLFDCLESTVPRASVERQKVEKMLFGEEIKNIIACEGIQRKERHEKLEKWILRLELAGFGKVSLSYNGLLQAGRLLQNYGYDGYTLKEENGCLLLCWHDRPLFSVSAWR
Eucgr.G03258.3
GRAS
49
464
LIRYLIGCANHVAAGSVDNANICLEQISHHASPDGDTMQRIAAYFTEALADRILKGWPGLHKALNSTKISPVSEEILVKRWFFELCPFLKLAYVITNQAILEAMDGEKMVHIIDLNSFEPAQWVNLLQSLRARPEGPPHLRITGIHEQKEVLDQMALRLNEEAEKLDIPFQFNPVVCKLENLDLESLRVKTGEALAISSVLQLHTILAADDEMQRRTSPSASNSSNSSHQQRALHMKQRTLGEWLEKDVVNLYCASPDSALVSSPKMGGFLTSLWGLSPKLMVITEQESNHNGTLMERYVEALYFYGSLFDCLESTVPRASVERQKVEKMLFGEEIKNIIACEGIQRKERHEKLEKWILRLELAGFGKVSLSYNGLLQAGRLLQNYGYDGYTLKEENGCLLLCWHDRPLFSVSAWR
Eucgr.G03258.4
GRAS
1
401
MTDNANICLEQISHHASPDGDTMQRIAAYFTEALADRILKGWPGLHKALNSTKISPVSEEILVKRWFFELCPFLKLAYVITNQAILEAMDGEKMVHIIDLNSFEPAQWVNLLQSLRARPEGPPHLRITGIHEQKEVLDQMALRLNEEAEKLDIPFQFNPVVCKLENLDLESLRVKTGEALAISSVLQLHTILAADDEMQRRTSPSASNSSNSSHQQRALHMKQRTLGEWLEKDVVNLYCASPDSALVSSPKMGGFLTSLWGLSPKLMVITEQESNHNGTLMERYVEALYFYGSLFDCLESTVPRASVERQKVEKMLFGEEIKNIIACEGIQRKERHEKLEKWILRLELAGFGKVSLSYNGLLQAGRLLQNYGYDGYTLKEENGCLLLCWHDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026544
Oryza indica
BGIOSGA026544
N
BGIOSGA026545
Oryza indica
BGIOSGA026545
N
GRMZM2G124011
Zea mays
GRMZM2G124011
I
GRMZM2G175856
Zea mays
GRMZM2G175856
N
OGLUM08G23770
Oryza glumaepatula
OGLUM08G23770
N
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
Sb07g025210
Sorghum bicolor
Sb07g025210
N