CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.H03356
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.H03356
T202472_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.H03356.1
GRAS
331
627
LVHLLLACAEAVAKDDYMLARKYLHHLNRIVSPIGDSMQRVASCFTEALSARLTATLTTRPTSSSAKPFTPFPPNSPEILKYYQILYQACPYIKFAHFTANQAIFEAIEFEERVHVIDLDIHQGYQWPAFMQALAARPAGAPFLRITGVGPEIEAMCETGRCLTELAHSLHIPFEFHPVGEQLEDLKPHMLNRRVGEALAVSSVNRLHRVPAHCLGSLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAQVEQYIFAPEIRNVVACEGAERT
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_011_00061
Aquilegia coerulea
Aquca_011_00061
N
0.773
Aquca_021_00065
Aquilegia coerulea
Aquca_021_00065
N
0.753
cassava38785.m1
Manihot esculenta
cassava38785.m1
N
0.837
Cla012038
Citrullus lanatus
Cla012038
N
0.834
Cucsa.087900
Cucumis sativus
Cucsa.087900
N
0.837
gene01356-v1.0-hybrid
Fragaria vesca
gene01356-v1.0-hybrid
N
0.841
GLYMA19G26735
Glycine max
GLYMA19G26735
N
0.807
GRMZM2G342217
Zea mays
GRMZM2G342217
N
0.708
Lus10041540.g
Linum usitatissimum
Lus10041540.g
N
0.858
MTR_7g027190
Medicago truncatula
MTR_7g027190
N
0.831
ONIVA11G13990
Oryza nivara
ONIVA11G13990
N
0.702
Pm016121
Prunus mume
Pm016121
N
0.841
Si027708m.g
Setaria italica
Si027708m.g
N
0.708
TCM_017269
Theobroma cacao
TCM_017269
N
0.858