CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_74.80
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_74.80
T202535_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_74.80
GRAS
274
646
LLALLTGCVEAIGSKNIPAINHFIAKLGDLASPRAGNPVSRLTAYYTEALALRVTRLWPQIFHVTTPREFDRVDDDLGGTALRLLNQVSPIPKFIHFTANEMLLRAFEGKDRVHIIDFDIKQGLQWPSFFQSLACRRNPPTHVRITGIGESKQELNETGDRLAVFAESLNLPFEFHPVVDRLEDVRLWMLHVKEKENVGVNCIFQLHKILYDGNRAAFRDFLGLIRSTNPTAIVMAEQEAEHNTLSLESRVCNSLKYYAAIFDSINCTNLPVDSPVRMKIEEMFGREIRSIVACEGSERVERHERFEKWKTMMEQGGFRCMGVSEREKVQSQMLLKMYSCDNFHVRQQGEENDGAALTLTWEDQPLYTVSSWA
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000951
Ailuropoda melanoleuca
ENSAMEG00000000951
N
ENSCSAG00000004276
Chlorocebus sabaeus
ENSCSAG00000004276
N
ENSMPUG00000005786
Mustela putorius furo
ENSMPUG00000005786
N
ENSNLEG00000011666
Nomascus leucogenys
ENSNLEG00000011666
N
ENSOARG00000005210
Ovis aries
ENSOARG00000005210
N
ENSP00000376021-D1
Bos grunniens
ENSP00000376021-D1
N
ENSPANG00000000380
Papio anubis
ENSPANG00000000380
N
ENSPPYG00000009894
Pongo abelii
ENSPPYG00000009894
N
ENSSSCG00000002922
Sus scrofa
ENSSSCG00000002922
N
ENSSTOG00000009866
Ictidomys tridecemlineatus
ENSSTOG00000009866
N
THAP8
Otolemur garnettii
ENSOGAG00000028798
N
THAP8
Bos taurus
ENSBTAG00000014995
N
THAP8
Tursiops truncatus
ENSTTRG00000003916
N
THAP8
Tupaia belangeri
ENSTBEG00000014630
N
THAP8
Pteropus vampyrus
ENSPVAG00000012877
N
THAP8
Felis catus
ENSFCAG00000014136
N
THAP8
Oryctolagus cuniculus
ENSOCUG00000026101
N
THAP8
Canis familiaris
ENSCAFG00000006649
N
THAP8
Callithrix jacchus
ENSCJAG00000009688
N
THAP8
Dasypus novemcinctus
ENSDNOG00000043332
N
THAP8
Macaca mulatta
ENSMMUG00000019702
N
THAP8
Microcebus murinus
ENSMICG00000010199
N
THAP8
Gorilla gorilla
ENSGGOG00000024516
N
THAP8
Homo sapiens
ENSG00000161277
N