CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g005326m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g005326m.g
T202924_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g005326m
GRAS
343
701
ITDQIFKASELIETGNPVHAQGILARLNHQLSPIGKPFQRAAFYFKEALQLLLHMNMNNSSLALSGYSIIFKISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPFELEILSLEALNSASLALPLRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWR
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BOTBODRAFT_110614
Botryobasidium botryosum
BOTBODRAFT_110614
N
GLOINDRAFT_73641
Rhizophagus irregularis
GLOINDRAFT_73641
N
K437DRAFT_222006
Tilletiaria anomala
K437DRAFT_222006
N
MSY001_0362
Malassezia sympodialis
MSY001_0362
N
PAN0_006d3044
Pseudozyma antarctica
PAN0_006d3044
N
PFL1_05511
Pseudozyma flocculosa
PFL1_05511
N
PHSY_002799
Pseudozyma hubeiensis
PHSY_002799
N
PSEUBRA_SCAF7g04630
Pseudozyma brasiliensis
PSEUBRA_SCAF7g04630
N
sr14210
Sporisorium reilianum
sr14210
N
UHOR_04942
Ustilago hordei
UHOR_04942
N
UM03167
Ustilago maydis
UM03167
N
V565_111340
Rhizoctonia solani
V565_111340
N