CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g011736m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g011736m.g
T202937_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g011736m
GRAS
49
473
LIHLLVACANHVAAGSVENANIGLEQISHLASPDGDTVQRIAAYFTEALADRMLKAWPGLHKALNSTKISSITEEIIVQKLFFELCPFLKLSYVITNQAIVEAMEGEKMVHIIDLNSFEPAQWINLLQTLSARPEGPPHLRITGIHEQKEVLEQMALRLTEEAEKLDIPFQFNPIVSKLENVDLESLRKTGEALAVSSVLQMHRLLATDDEMPRRTSPSASRTSSSSHLQRVLHMNRRTLGEWLEKDSVLMFSPSPDSASASASTPLSLAASPKMGSFLNALWSLSPKVVVVTEQESNHNGPSLMERVMEALNFYAAMFDCLESTMSRASIERQKVEKMLFGEEIKNIIACEGIERRERHEKLEKWILRLELAGFGRMPLSYHGILQARRLLQSYGYDGYKIKEENGCLVICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
4123_Multiple
Saccharomyces mikatae
4123_Multiple
I
4515_Multiple
Saccharomyces bayanus
4515_Multiple
I
4533_YDR213W
Saccharomyces paradoxus
4533_YDR213W
I
AACERI_AaceriAGL091W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL091W
I
AGOS_AGL091W
Ashbya gossypii
AGOS_AGL091W
I
CAGL0F07865g
Candida glabrata
CAGL0F07865g
N
KLTH0F07854g
Lachancea thermotolerans
KLTH0F07854g
I
KLTH0F07854g
Kluyveromyces thermotolerans
KLTH0F07854g
I
KNAG_0A02550
Kazachstania naganishii
KNAG_0A02550
I
Kpol_529p15
Vanderwaltozyma polyspora
Kpol_529p15
N
LALA0_S12e02300g
Lachancea lanzarotensis
LALA0_S12e02300g
N
NCAS_0C02730
Naumovozyma castellii
NCAS_0C02730
I
NDAI_0C04840
Naumovozyma dairenensis
NDAI_0C04840
I
SAKL0H13024g
Lachancea kluyveri
SAKL0H13024g
I
Scas_Contig679.26
Saccharomyces castellii
Scas_Contig679.26
I
SU7_2615
Saccharomyces arboricola
SU7_2615
I
TDEL_0F05470
Torulaspora delbrueckii
TDEL_0F05470
N
UPC2
Saccharomyces cerevisiae
YDR213W
D
ZBAI_01680
Zygosaccharomyces bailii
ZBAI_01680
N
ZBAI_09613
Zygosaccharomyces bailii
ZBAI_09613
I
ZYRO0A09350g
Zygosaccharomyces rouxii
ZYRO0A09350g
N