Pavir.J06020 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.J06020 T203043_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06020.1.p GRAS 54 423

Links

Other GRAS family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_029500 Albugo laibachii ALNC14_029500 N
estExt_fgenesh1_kg.C_150093 Phytophthora capsici estExt_fgenesh1_kg.C_150093 N
estExt_fgenesh1_kg.C_2070034 Phytophthora capsici estExt_fgenesh1_kg.C_2070034 N
estExt_fgenesh1_pm.C_680840001 Phytophthora capsici estExt_fgenesh1_pm.C_680840001 N
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I
F443_00625 Phytophthora parasitica F443_00625 N
F443_20671 Phytophthora parasitica F443_20671 I
F443_20672 Phytophthora parasitica F443_20672 N
F443_20702 Phytophthora parasitica F443_20702 I
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I
fgenesh_scip_prom.28083.3854 Phytophthora lateralis fgenesh_scip_prom.28083.3854 N
fgenesh_scip_prom.46568.7328 Phytophthora kernoviae fgenesh_scip_prom.46568.7328 N
fgenesh_scip_prom.46568.9767 Phytophthora kernoviae fgenesh_scip_prom.46568.9767 N
fgenesh_scip_prom.46568.9768 Phytophthora kernoviae fgenesh_scip_prom.46568.9768 N
HpaG809807 Hyaloperonospora arabidopsidis HpaG809807 N
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I
HpaG811464 Hyaloperonospora arabidopsidis HpaG811464 N
maker-pag1_scaffold_154-snap-gene-0.25 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.25 N
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N
maker-pir_contig_524-snap-gene-0.9 Pythium irregulare maker-pir_contig_524-snap-gene-0.9 N
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I
maker-piw_contig_1647-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1647-snap-gene-0.3 N
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I
maker-piw_contig_637-snap-gene-0.12 Pythium iwayamai maker-piw_contig_637-snap-gene-0.12 N
maker-piw_contig_841-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_841-fgenesh-gene-0.2 N
maker-pve_contig_734-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_734-fgenesh-gene-0.2 N
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I
maker-pve_contig_871-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_871-fgenesh-gene-0.0 N
Phyra73320 Phytophthora ramorum Phyra73320 N
Phyra80922 Phytophthora ramorum Phyra80922 N
Phyra80923 Phytophthora ramorum Phyra80923 N
Phyra80925 Phytophthora ramorum Phyra80925 N
Physo132945 Phytophthora sojae Physo132945 I
Physo132965 Phytophthora sojae Physo132965 N
Physo138282 Phytophthora sojae Physo138282 N
PITG_10310 Phytophthora infestans PITG_10310 N
PITG_11562 Phytophthora infestans PITG_11562 N
PITG_14400 Phytophthora infestans PITG_14400 I
PYU1_G002832 Pythium ultimum PYU1_G002832 N
PYU1_G002835 Pythium ultimum PYU1_G002835 I
PYU1_G002844 Pythium ultimum PYU1_G002844 N
PYU1_G002847 Pythium ultimum PYU1_G002847 N
PYU1_G002849 Pythium ultimum PYU1_G002849 I