CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0033s0490
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.0033s0490
T203111_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0033s0490.1.p
GRAS
253
610
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
SapurV1A.0033s0490.2.p
GRAS
253
610
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
SapurV1A.0033s0490.3.p
GRAS
217
574
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
SapurV1A.0033s0490.4.p
GRAS
217
574
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
SapurV1A.0033s0490.5.p
GRAS
211
568
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
SapurV1A.0033s0490.6.p
GRAS
211
568
IINPICQAAELIETGNPVLAQGILARLNHQLSVPIGKPYQRAAFYFKEALQLLLNMNNNNSIGIACNLIFKIGAYKSFSEISPILQFENFTCNQALLEAFEGFERIHVVDFDIGYGGQWASLMQELALRNGGAPSLKITAFASPSSQDELELGFTQENLKIFASEVNMPFELEILSLESLSSGSWPMHLRVTEKEVIAVNLPVGSFSNYPSTLPLVLRFVKQLSPKVVVSLDRGCYRSDLPFAHHVNHAIQSYTSLLESLDAVNVNLDALQKIERFLVRPGIEKSVLGRHCSLYMTAPWRSLFLQSGFTPLTFSNFTESQAEYLVQRTPVRGFHVEKRQSSLVLCWQQKDLVSASAWG
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008828
Ricinus communis
30174.m008828
N
0.767
cassava19916.m1
Manihot esculenta
cassava19916.m1
N
0.770
Ciclev10019083m.g
Citrus clementina
Ciclev10019083m.g
N
0.732
Ciclev10019094m.g
Citrus clementina
Ciclev10019094m.g
N
0.721
evm.TU.supercontig_49.157
Carica papaya
evm.TU.supercontig_49.157
N
0.736
Gorai.008G106000
Gossypium raimondii
Gorai.008G106000
N
0.753
Gorai.008G106100
Gossypium raimondii
Gorai.008G106100
N
0.719
orange1.1g005237m.g
Citrus sinensis
orange1.1g005237m.g
N
0.732
orange1.1g005326m.g
Citrus sinensis
orange1.1g005326m.g
N
0.721
PGSC0003DMG400025973
Solanum tuberosum
PGSC0003DMG400025973
N
0.713
POPTR_0002s14500
Populus trichocarpa
POPTR_0002s14500
N
0.857
POPTR_0002s14550
Populus trichocarpa
POPTR_0002s14550
N
0.913
POPTR_0014s05910
Populus trichocarpa
POPTR_0014s05910
N
0.823
POPTR_0014s05940
Populus trichocarpa
POPTR_0014s05940
N
0.829
SapurV1A.0033s0460
Salix purpurea
SapurV1A.0033s0460
N
0.890
SapurV1A.0248s0400
Salix purpurea
SapurV1A.0248s0400
N
0.817
SapurV1A.0382s0350
Salix purpurea
SapurV1A.0382s0350
N
0.829
SapurV1A.1971s0010
Salix purpurea
SapurV1A.1971s0010
N
0.829
Solyc01g090950.2
Solanum lycopersicum
Solyc01g090950.2
N
0.719
TCM_005571
Theobroma cacao
TCM_005571
N
0.781
VIT_15s0048g00270
Vitis vinifera
VIT_15s0048g00270
N
0.733