CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT15C06.70.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjT15C06.70.nc
T203321_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT15C06.70.nc
GRAS
101
485
LVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTDALQGLLDGAAGAHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALSRSCGRGGGRRSIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRTGEEDEEGSGSWGEWLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVWT
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006159
Ricinus communis
29908.m006159
N
0.735
Aquca_014_00175
Aquilegia coerulea
Aquca_014_00175
N
0.735
cassava32027.m1
Manihot esculenta
cassava32027.m1
N
0.709
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.751
Ca_23494
Cicer arietinum
Ca_23494
N
0.780
Ca_26279
Cicer arietinum
Ca_26279
N
0.770
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.776
Eucgr.L03490
Eucalyptus grandis
Eucgr.L03490
N
0.743
evm.TU.supercontig_36.32
Carica papaya
evm.TU.supercontig_36.32
N
0.719
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.735
GLYMA04G43090
Glycine max
GLYMA04G43090
N
0.755
GLYMA06G11610
Glycine max
GLYMA06G11610
N
0.738
GLYMA13G02840
Glycine max
GLYMA13G02840
N
0.748
Gorai.009G244200
Gossypium raimondii
Gorai.009G244200
N
0.715
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.747
LjT26J05.10.nc
Lotus japonicus
LjT26J05.10.nc
N
0.723
Lus10008316.g
Linum usitatissimum
Lus10008316.g
N
0.703
MDP0000319342
Malus domestica
MDP0000319342
N
0.733
MTR_3g072710
Medicago truncatula
MTR_3g072710
N
0.744
MTR_5g058860
Medicago truncatula
MTR_5g058860
N
0.792
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.762
PGSC0003DMG400012071
Solanum tuberosum
PGSC0003DMG400012071
N
0.714
Pm004863
Prunus mume
Pm004863
N
0.747
POPTR_0002s08660
Populus trichocarpa
POPTR_0002s08660
N
0.733
POPTR_0005s15900
Populus trichocarpa
POPTR_0005s15900
N
0.738
PRUPE_ppa018977mg
Prunus persica
PRUPE_ppa018977mg
N
0.738
SapurV1A.0010s0900
Salix purpurea
SapurV1A.0010s0900
N
0.719
SapurV1A.0105s0110
Salix purpurea
SapurV1A.0105s0110
N
0.716
Solyc11g013150.1
Solanum lycopersicum
Solyc11g013150.1
N
0.715
TCM_035069
Theobroma cacao
TCM_035069
N
0.754
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.765