CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Brh_R001815
(
Buceros rhinoceros
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02946 (GTF2I)
IPR004212
Brh_R001815
T203557_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R001815
GTF2I-like
74
148
LRKQVDEVFEEKYAEALNVKGPVSIPYAIFQSNTEDLYVEGLPEGVPFRRPSTYGIPRLERILLAKERIHFVIKK
Brh_R001815
GTF2I-like
179
253
LRKTVDELFCKKFAEALGSTEPKAVPYQKFEAHPTDLYVEGLPVNIPFRSPSWYGIPRLEKIIQVGHKIKFVIKR
Brh_R001815
GTF2I-like
284
358
LRKQVEMIFNTKFGQALGLSEAVKVPYPVFEANPEDLYVEGLPDGIPFRSPTWFGIPRLERILRGNAKIKFIVKK
Brh_R001815
GTF2I-like
447
521
LKQRVEKLFNEKCAEALGLTEPVKVPFTLFESSPEVFCVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIKFIIKK
Brh_R001815
GTF2I-like
591
665
LREQVNDLFSQKYGEAIGMTHPVRVPYRNINSNPGCVVVDGLPRGVVFKAPSYLEISSMKKILESKKSIKFNIVR
Links
Other
GTF2I-like
family TFs
Other
Buceros rhinoceros
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m011218
Ricinus communis
30190.m011218
N
AMTR_s00009p00253500
Amborella trichopoda
AMTR_s00009p00253500
N
Aquca_038_00045
Aquilegia coerulea
Aquca_038_00045
N
AT1G63490
Arabidopsis thaliana
AT1G63490
N
BGIOSGA020494
Oryza indica
BGIOSGA020494
N
Bo9g029100
Brassica oleracea
Bo9g029100
N
Bostr.9600s0015
Boechera stricta
Bostr.9600s0015
N
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
Cagra.2104s0024
Capsella grandiflora
Cagra.2104s0024
N
cassava14944.m1
Manihot esculenta
cassava14944.m1
N
chr2.CM0304.950.nc
Lotus japonicus
chr2.CM0304.950.nc
N
Cla007529
Citrullus lanatus
Cla007529
I
Eucgr.D01851
Eucalyptus grandis
Eucgr.D01851
N
gene32474-v1.0-hybrid
Fragaria vesca
gene32474-v1.0-hybrid
N
GLYMA01G42890
Glycine max
GLYMA01G42890
N
GLYMA11G02580
Glycine max
GLYMA11G02580
N
Gorai.004G211700
Gossypium raimondii
Gorai.004G211700
N
GRMZM2G466292
Zea mays
GRMZM2G466292
N
LPERR06G23820
Leersia perrieri
LPERR06G23820
N
Lus10008495.g
Linum usitatissimum
Lus10008495.g
N
MDP0000158904
Malus domestica
MDP0000158904
N
MDP0000162827
Malus domestica
MDP0000162827
N
MDP0000286412
Malus domestica
MDP0000286412
N
MDP0000287313
Malus domestica
MDP0000287313
N
mgf018831m
Mimulus guttatus
mgf018831m
N
MTR_5g010300
Medicago truncatula
MTR_5g010300
N
OBART06G28370
Oryza barthii
OBART06G28370
N
OGLUM06G29760
Oryza glumaepatula
OGLUM06G29760
N
OLONG_013925
Oryza longistaminata
OLONG_013925
N
OMERI06G28260
Oryza meridionalis
OMERI06G28260
N
ONIVA06G31490
Oryza nivara
ONIVA06G31490
N
orange1.1g000212m.g
Citrus sinensis
orange1.1g000212m.g
N
ORGLA06G0289500
Oryza glaberrima
ORGLA06G0289500
N
ORUFI06G30290
Oryza rufipogon
ORUFI06G30290
N
OS06G0731600
Oryza sativa
OS06G0731600
N
PDK_20s1401711g002
Phoenix dactylifera
PDK_20s1401711g002
N
PK05702.1
Cannabis sativa
PK05702.1
N
Pm023825
Prunus mume
Pm023825
N
Sb10g031260
Sorghum bicolor
Sb10g031260
N
scaffold_200168.1
Arabidopsis lyrata
scaffold_200168.1
N
Si005667m.g
Setaria italica
Si005667m.g
N
Solyc08g081000.2
Solanum lycopersicum
Solyc08g081000.2
N
TCM_016246
Theobroma cacao
TCM_016246
N
Thhalv10023217m.g
Eutrema salsugineum
Thhalv10023217m.g
N