Bo9g066790 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo9g066790 T204999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.853 0.772
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.850 0.789
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.850 0.789
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.839 0.772
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.839 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.837 0.754
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.837 0.754
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.812 0.719
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.812 0.719
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.797 0.737
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.797 0.737
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.797 0.737
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.791 0.632
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.754 0.632
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.754 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g066790.1 Homeodomain 113 169

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP14716 Atta cephalotes ACEP14716 I
ACEP26693 Atta cephalotes ACEP26693 N
AFAF002703 Anopheles farauti AFAF002703 N
AFUN015812 Anopheles funestus AFUN015812 N
AFUN015813 Anopheles funestus AFUN015813 N
Cflo_01074--XP_394229.2_APIME Camponotus floridanus Cflo_01074--XP_394229.2_APIME N
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I
ENSOANG00000022637 Ornithorhynchus anatinus ENSOANG00000022637 I
GB47180 Apis mellifera GB47180 I
GB54865 Apis mellifera GB54865 N
HMEL016424 Heliconius melpomene HMEL016424 I
Hsal_00608--XP_394229.2_APIME Harpegnathos saltator Hsal_00608--XP_394229.2_APIME N
KGM_04261 Danaus plexippus KGM_04261 I
LDEC000156 Leptinotarsa decemlineata LDEC000156 N
LLOJ006615 Lutzomyia longipalpis LLOJ006615 I
MCINX007129 Melitaea cinxia MCINX007129 I
NV15957 Nasonia vitripennis NV15957 N
PHUM533080 Pediculus humanus PHUM533080 I
PPAI004956 Phlebotomus papatasi PPAI004956 I
SINV24483 Solenopsis invicta SINV24483 I